RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 CRYZQ08257 329 aaKnown RBP6.95□□□□□ -1.3
USP53-206ENST00000510737 GPS2Q13227 327 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 DGKKQ5KSL6 1271 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 ENTPD8Q5MY95 495 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 CYB5R4Q7L1T6 521 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 BEND5Q7L4P6 421 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 CCDC105Q8IYK2 499 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 UBALD2Q8IYN6 164 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 MORC4Q8TE76 937 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 RUBCNQ92622 972 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 PMM1Q92871 262 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 DCLK3Q9C098 648 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 RMI1Q9H9A7 625 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 HIF1ANQ9NWT6 349 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 MCM9Q9NXL9 1143 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 RGL1Q9NZL6 768 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 PLEKHB1Q9UF11 243 aaPredicted RBP6.95□□□□□ -1.3
USP53-206ENST00000510737 TCEAL9Q9UHQ7 104 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 MAST4O15021 2626 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 MYO7AQ13402 2215 aa6.95□□□□□ -1.3
USP53-206ENST00000510737 PARP14Q460N5 1801 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 ZFYVE26Q68DK2 2539 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 F5H6K3 240 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 J3KTA2 159 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 GAS8-AS1O95177 125 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 KLKB1P03952 638 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 MMP1P03956 469 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 UBTFL1P0CB47 393 aaPredicted RBP6.94□□□□□ -1.3
USP53-206ENST00000510737 SRGAP2BP0DMP2 458 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 NRIP1P48552 1158 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 PCYT1AP49585 367 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 PRIM2P49643 509 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 RASSF2P50749 326 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
USP53-206ENST00000510737 KLRC3Q07444 240 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 SLC16A12Q6ZSM3 486 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 WDR63Q8IWG1 891 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 ENGASEQ8NFI3 743 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 VN1R2Q8NFZ6 395 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 OR6J1Q8NGC5 347 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 S1PR5Q9H228 398 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 UBE2J1Q9Y385 318 aaPredicted RBP6.94□□□□□ -1.3
USP53-206ENST00000510737 MCM3APO60318 1980 aa6.94□□□□□ -1.3
USP53-206ENST00000510737 FRYQ5TBA9 3013 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SPTBN2O15020 2390 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 APOL1O14791 398 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 IDH1O75874 414 aaKnown RBP6.93□□□□□ -1.3
USP53-206ENST00000510737 PPP1R3DO95685 299 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 NDUFB10O96000 172 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 AOC1P19801 751 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SP100P23497 879 aaPredicted RBP6.93□□□□□ -1.3
USP53-206ENST00000510737 OAZ1P54368 228 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 POLE2P56282 527 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 NSUN2Q08J23 767 aaKnown RBP eCLIP6.93□□□□□ -1.3
USP53-206ENST00000510737 CBFBQ13951 182 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 MAPKAPK3Q16644 382 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 PRSS57Q6UWY2 283 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 FAM83HQ6ZRV2 1179 aaPredicted RBP6.93□□□□□ -1.3
USP53-206ENST00000510737 ZNF329Q86UD4 541 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 CERS3Q8IU89 383 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SUMF1Q8NBK3 374 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SRFBP1Q8NEF9 429 aaKnown RBP6.93□□□□□ -1.3
USP53-206ENST00000510737 SPPL3Q8TCT6 385 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 ATP8B4Q8TF62 1192 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SDR42E1Q8WUS8 393 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 ADAMTS14Q8WXS8 1223 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 NR4A3Q92570 626 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 COLEC11Q9BWP8 271 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 MFSD1Q9H3U5 465 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 ACAD9Q9H845 621 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 KRCC1Q9NPI7 259 aaPredicted RBP6.93□□□□□ -1.3
USP53-206ENST00000510737 PLSCR4Q9NRQ2 329 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 SWAP70Q9UH65 585 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 MYH1P12882 1939 aa6.93□□□□□ -1.3
USP53-206ENST00000510737 ASH1LQ9NR48 2969 aaKnown RBP6.92□□□□□ -1.3
USP53-206ENST00000510737 LOC105369274A0A096LPK9 316 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 LOC102723532A0A0G2JNH3 316 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 FAM234BA2RU67 622 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 GAGE12JA6NER3 117 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 I6L893 689 aaPredicted RBP6.92□□□□□ -1.3
USP53-206ENST00000510737 PER2O15055 1255 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 IGKV3-20P01619 116 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 IGFBP2P18065 325 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 STT3AP46977 705 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 CCDC158Q5M9N0 1113 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 MDGA2Q7Z553 956 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 OR4N4Q8N0Y3 316 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 IFIH1Q9BYX4 1025 aaKnown RBP6.92□□□□□ -1.3
USP53-206ENST00000510737 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.92□□□□□ -1.3
USP53-206ENST00000510737 RNF146Q9NTX7 359 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 CYP39A1Q9NYL5 469 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 HDAC6Q9UBN7 1215 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 PTPRCP08575 1304 aa6.92□□□□□ -1.3
USP53-206ENST00000510737 SCN10AQ9Y5Y9 1956 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 OR6C75A6NL08 312 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 RSPH10B2B2RC85 870 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 C2CD4DB7Z1M9 353 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 SPRY3O43610 288 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 CYP1A2P05177 515 aa6.91□□□□□ -1.3
USP53-206ENST00000510737 ALDOCP09972 364 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms