RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 GATA5Q9BWX5 397 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 CEP44Q9C0F1 390 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 C20orf27Q9GZN8 174 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 ILKAPQ9H0C8 392 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 CDH19Q9H159 772 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 CCDC68Q9H2F9 335 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 ATP13A3Q9H7F0 1226 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 SUDS3Q9H7L9 328 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 SYTL2Q9HCH5 934 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 TDP1Q9NUW8 608 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 POLR3BQ9NW08 1133 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 NCKIPSDQ9NZQ3 722 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 VTI1BQ9UEU0 232 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 MARCOQ9UEW3 520 aaPredicted RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 HAO1Q9UJM8 370 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 SLC25A13Q9UJS0 675 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 HS3ST2Q9Y278 367 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 FCF1Q9Y324 198 aaKnown RBP7.86□□□□□ -1.15
SSBP2-213ENST00000509743 RAP2CQ9Y3L5 183 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 ZNF711Q9Y462 761 aa7.86□□□□□ -1.15
SSBP2-213ENST00000509743 DNAH12Q6ZR08 3092 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 A0A1W2PQ67 120 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CCL22O00626 93 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HTRA2O43464 458 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 BUD23O43709 281 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 DLX3O60479 287 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CLASP2O75122 1294 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 MOSPD3O75425 235 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 RFPL2O75678 378 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PYGLP06737 847 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PDHA1P08559 390 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CCDC166P0CW27 439 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HSPA1AP0DMV8 641 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HSPA1BP0DMV9 641 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 T-ENOLP0DO92 83 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 KITP10721 976 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 MC4RP32245 332 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CD70P32970 193 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HMGCLP35914 325 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 GMPRP36959 345 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ABL2P42684 1182 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PTGER3P43115 390 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 NUMBP49757 651 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 IDH3AP50213 366 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PTPN5P54829 565 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ADARP55265 1226 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CDKN2DP55273 166 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 NAA20P61599 178 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 SNRPD1P62314 119 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ELF3P78545 371 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 NFKB2Q00653 900 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CACNG1Q06432 222 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 DLG1Q12959 904 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PDAP1Q13442 181 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 RIPK1Q13546 671 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CSHL1Q14406 222 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ZNF77Q15935 545 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PRSS36Q5K4E3 855 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ATXN7L2Q5T6C5 722 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 METTL21CQ5VZV1 264 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ZNF549Q6P9A3 640 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 CERS6Q6ZMG9 384 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TPGS1Q6ZTW0 290 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 APCDD1Q8J025 514 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 AFAP1L2Q8N4X5 818 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PCDH20Q8N6Y1 951 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 EFHBQ8N7U6 833 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TTC16Q8NEE8 873 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 OR2AP1Q8NGE2 309 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 LPGAT1Q92604 370 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 IRF7Q92985 503 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 BHMTQ93088 406 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TCEAL4Q96EI5 215 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PTCD3Q96EY7 689 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 FAR2Q96K12 515 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 LMLNQ96KR4 655 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TTC1Q99614 292 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 C17orf80Q9BSJ5 609 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TRMOQ9BU70 441 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HTATIP2Q9BUP3 242 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 SLC2A11Q9BYW1 496 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 GPR63Q9BZJ6 419 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TM6SF2Q9BZW4 377 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 NMUR2Q9GZQ4 415 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 POMKQ9H5K3 350 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TFB2MQ9H5Q4 396 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TLE6Q9H808 572 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 EML4Q9HC35 981 aaKnown RBP7.85□□□□□ -1.15
SSBP2-213ENST00000509743 KLC4Q9NSK0 619 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 HCFC1R1Q9NWW0 138 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TAS2R13Q9NYV9 303 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 MARK1Q9P0L2 795 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 TMCO1Q9UM00 188 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 PCDHB9Q9Y5E1 797 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 SLC30A1Q9Y6M5 507 aa7.85□□□□□ -1.15
SSBP2-213ENST00000509743 NYNRINQ9P2P1 1898 aaKnown RBP7.84□□□□□ -1.15
SSBP2-213ENST00000509743 A0A0J9YYE9 177 aa7.84□□□□□ -1.15
SSBP2-213ENST00000509743 UBA6A0AVT1 1052 aaPredicted RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms