RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 WDR5BQ86VZ2 330 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 LONP2Q86WA8 852 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 NRSN1Q8IZ57 195 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 CNPY4Q8N129 248 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 TTC30BQ8N4P2 665 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 HDDC3Q8N4P3 179 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 DNAAF3Q8N9W5 541 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 LPCAT1Q8NF37 534 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 MYRIPQ8NFW9 859 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 CADM4Q8NFZ8 388 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 OR2T34Q8NGX1 318 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 STYXQ8WUJ0 223 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 PDCD6IPQ8WUM4 868 aaKnown RBP8.65□□□□□ -1.02
USP46-207ENST00000508499 HMGB4Q8WW32 186 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 PLEKHG4BQ96PX9 1271 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 FMO2Q99518 471 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 FUT8Q9BYC5 575 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 TRIM31Q9BZY9 425 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 BTBD1Q9H0C5 482 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 NEUROG2Q9H2A3 272 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 DPH5Q9H2P9 285 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 ZFYVE1Q9HBF4 777 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 TREX1Q9NSU2 369 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 WSB2Q9NYS7 404 aaPredicted RBP8.65□□□□□ -1.02
USP46-207ENST00000508499 IL17CQ9P0M4 197 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 B4GALT6Q9UBX8 382 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 SERGEFQ9UGK8 458 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 SOX13Q9UN79 622 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 TCAF1Q9Y4C2 921 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 SPAG17Q6Q759 2223 aa8.65□□□□□ -1.02
USP46-207ENST00000508499 IGHV1OR15-9A0A0B4J2B8 117 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 A0A1W2PP55 124 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 ESYT3A0FGR9 886 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 LRRC72A6NJI9 287 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 C2orf81A6NN90 581 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 AGAP14A8MT82 685 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 AXIN1O15169 862 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 RNASEH2AO75792 299 aaKnown RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 USP1O94782 785 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 PYGLP06737 847 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 GSTA2P09210 222 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 RHOXF2BP0C7M4 288 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 LPOP22079 712 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 CD6P30203 668 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 HADHAP40939 763 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 CARSP49589 748 aaKnown RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 CCR5P51681 352 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 STC1P52823 247 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 PLTPP55058 493 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 RPS21P63220 83 aaKnown RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 PTSQ03393 145 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 OLIG2Q13516 323 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 SPARCL1Q14515 664 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 NUMA1Q14980 2115 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 SLMAPQ14BN4 828 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 TRADDQ15628 312 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 CNGA3Q16281 694 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 CCDC38Q502W7 563 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 FAM182AQ5T1J6 154 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 STEAP4Q687X5 459 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 LRRC66Q68CR7 880 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 PDPK2PQ6A1A2 396 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 ANO7Q6IWH7 933 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 SLC36A4Q6YBV0 504 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 CCNI2Q6ZMN8 369 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 TECPR1Q7Z6L1 1165 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.64□□□□□ -1.03
USP46-207ENST00000508499 ZBTB44Q8NCP5 570 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 EID2BQ96D98 161 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 COQ10AQ96MF6 247 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 LENG8Q96PV6 779 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 PRRX2Q99811 253 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 EBNA1BP2Q99848 306 aaKnown RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 RHOXF2Q9BQY4 288 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 C1QTNF2Q9BXJ5 285 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 TXLNGYQ9BZA5 131 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 NLE1Q9NVX2 485 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 SPATA6Q9NWH7 488 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 ZNF711Q9Y462 761 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 SPO11Q9Y5K1 396 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 ZDBF2Q9HCK1 2354 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 TP53BP1Q12888 1972 aaPredicted RBP8.64□□□□□ -1.03
USP46-207ENST00000508499 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
USP46-207ENST00000508499 C1orf232A0A0U1RR37 186 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 TOR1BO14657 336 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 RNGTTO60942 597 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 SPAG6O75602 509 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 POLBP06746 335 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ELFN1P0C7U0 828 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 GM2AP17900 193 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 XPAP23025 273 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 SPINT3P49223 89 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 ZNF140P52738 457 aaPredicted RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 MRPS25P82663 173 aaKnown RBP8.63□□□□□ -1.03
USP46-207ENST00000508499 ARHGEF7Q14155 803 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 SKIDA1Q1XH10 827 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 MSS51Q4VC12 460 aa8.63□□□□□ -1.03
USP46-207ENST00000508499 USP39Q53GS9 565 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms