RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 PNCKQ6P2M8 343 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 Q6ZVL8 140 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 ZNF605Q86T29 641 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 CNTD1Q8N815 330 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 TBATAQ96M53 351 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 LGMNQ99538 433 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 IL12RB2Q99665 862 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 CEP41Q9BYV8 373 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 SLC13A1Q9BZW2 595 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 DEF6Q9H4E7 631 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 KLQ9UEF7 1012 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 PPIL1Q9Y3C6 166 aa16.75■□□□□ 0.27
PDLIM7-215ENST00000506161 UNC13CQ8NB66 2214 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 BPTFQ12830 3046 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 TOR1BO14657 336 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 MATN3O15232 486 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 ATXN7O15265 892 aaPredicted RBP16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 CSO75390 466 aaKnown RBP16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 RASGRP1O95267 797 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 TPM3P06753 285 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 E2F1Q01094 437 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 LLGL1Q15334 1064 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 TECPR1Q7Z6L1 1165 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 CACTIN-AS1Q8N1I8 211 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 PAF1Q8N7H5 531 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 MAPK15Q8TD08 544 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 NXPE2Q96DL1 559 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 NUS1Q96E22 293 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 DTD2Q96FN9 168 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 SCRN2Q96FV2 425 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 DCBLD2Q96PD2 775 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 TSGA13Q96PP4 275 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 AGAP2Q99490 1192 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 NRSN2Q9GZP1 204 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 BRD8Q9H0E9 1235 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 TMEM168Q9H0V1 697 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 RBM22Q9NW64 420 aaKnown RBP eCLIP16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 CD84Q9UIB8 345 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 PHTF1Q9UMS5 762 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 CHKBQ9Y259 395 aa16.74■□□□□ 0.27
PDLIM7-215ENST00000506161 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 KCNK1O00180 336 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 MPOP05164 745 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 GP1BAP07359 652 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 ANXA6P08133 673 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 CCNCP24863 283 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 NOP2P46087 812 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 POLD2P49005 469 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 POLR2LP62875 67 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 ADCY2Q08462 1091 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 ITKQ08881 620 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 NR0B2Q15466 257 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 IFI16Q16666 785 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 HS1BP3Q53T59 392 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 ARMC12Q5T9G4 340 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 SLC9A4Q6AI14 798 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 NRROSQ86YC3 692 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 OR56A4Q8NGH8 313 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 RNF25Q96BH1 459 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 HDAC11Q96DB2 347 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 WDR24Q96S15 920 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 RBM15Q96T37 977 aaKnown RBP eCLIP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 TDRD1Q9BXT4 1180 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 SUDS3Q9H7L9 328 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 GULP1Q9UBP9 304 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 PLEKHM1Q9Y4G2 1056 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 PCYT1BQ9Y5K3 369 aaPredicted RBP16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 ENTPD2Q9Y5L3 495 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
PDLIM7-215ENST00000506161 CYSRT1A8MQ03 144 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 AKR1B15C9JRZ8 316 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 NOBOXO60393 691 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 KRT7P08729 469 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 TNNT1P13805 278 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 CCNB1P14635 433 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 MARCKSL1P49006 195 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 PTSQ03393 145 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 SARM1Q6SZW1 724 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 MFSD7Q6UXD7 560 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 HEATR4Q86WZ0 1026 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 SCAMP4Q969E2 229 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 CCDC74AQ96AQ1 378 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 PRR11Q96HE9 360 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 CCDC42Q96M95 316 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 CCDC3Q9BQI4 270 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 TEX101Q9BY14 249 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 FRMD8Q9BZ67 464 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 POLR1EQ9GZS1 481 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 RBSNQ9H1K0 784 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 ABCG8Q9H221 673 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 CYP4F12Q9HCS2 524 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 PADI4Q9UM07 663 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 TTLL3Q9Y4R7 772 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 DGKBQ9Y6T7 804 aa16.72■□□□□ 0.27
PDLIM7-215ENST00000506161 A0A0J9YYE9 177 aa16.71■□□□□ 0.27
PDLIM7-215ENST00000506161 A0A1W2PQM1 296 aa16.71■□□□□ 0.27
PDLIM7-215ENST00000506161 PRSS38A1L453 326 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms