RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 VASPP50552 380 aaPredicted RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 RPL26P61254 145 aaKnown RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 MGAT5Q09328 741 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 LAMB3Q13751 1172 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 SIM2Q14190 667 aaPredicted RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZNF234Q14588 700 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 GRM3Q14832 879 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 TSTD2Q5T7W7 516 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 AGBL2Q5U5Z8 902 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ARMC3Q5W041 872 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 EGFLAMQ63HQ2 1017 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 KCTD16Q68DU8 428 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 GDPD4Q6W3E5 623 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 MARK2Q7KZI7 788 aaKnown RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 NLRP9Q7RTR0 991 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 GLT6D1Q7Z4J2 308 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 TMEM135Q86UB9 458 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 KCNMB4Q86W47 210 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 RIBC1Q8N443 379 aaPredicted RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 OTUD6BQ8N6M0 293 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 FRS2Q8WU20 508 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 CDKL2Q92772 493 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 DNASE1L2Q92874 299 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ATP6V1G3Q96LB4 118 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZNF778Q96MU6 729 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 HEPHQ9BQS7 1158 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 STMN4Q9H169 189 aaPredicted RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZDHHC4Q9NPG8 344 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 SMYD2Q9NRG4 433 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 POLR3BQ9NW08 1133 aaPredicted RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 SLC17A6Q9P2U8 582 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 FETUBQ9UGM5 382 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 SLC2A6Q9UGQ3 507 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 IL36AQ9UHA7 158 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 TBK1Q9UHD2 729 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 RPL26L1Q9UNX3 145 aaKnown RBP9.38□□□□□ -0.91
TPM3-218ENST00000505010 ZNF711Q9Y462 761 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 ARL5AQ9Y689 179 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 PIAS3Q9Y6X2 628 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 FAM169AQ9Y6X4 670 aa9.38□□□□□ -0.91
TPM3-218ENST00000505010 WDFY3Q8IZQ1 3526 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 A0A0J9YYE9 177 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 MROH6A6NGR9 719 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 CXorf49A8MYA2 514 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 HMGB1P1B2RPK0 211 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 ANKRD66B4E2M5 251 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 WASH3PC4AMC7 463 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 CCL22O00626 93 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 HTRA2O43464 458 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 LDB2O43679 373 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 BUD23O43709 281 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 UGT1A9O60656 530 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 SIN3BO75182 1162 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 TRBC1P01850 177 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 C1QAP02745 245 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 ALPIP09923 528 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 SLC8A1P32418 973 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 IL12RB1P42701 662 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 GALK1P51570 392 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 SEC13P55735 322 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 TMPRSS15P98073 1019 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 MSLNQ13421 630 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 FZD5Q13467 585 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 NAB1Q13506 487 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 FRG1Q14331 258 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 TAF1AQ15573 450 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 HNRNPA1L2Q32P51 320 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 HSP90AA5PQ58FG0 334 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 PDPK2PQ6A1A2 396 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 KIAA0930Q6ICG6 404 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 ESRP1Q6NXG1 681 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 MAMSTRQ6ZN01 415 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 LRRC6Q86X45 466 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 ZSWIM9Q86XI8 627 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 TDRPQ86YL5 185 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 PLPP6Q8IY26 295 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 KRT222Q8N1A0 295 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 STK40Q8N2I9 435 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 KDM1BQ8NB78 822 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 BRSK1Q8TDC3 778 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 DCAKDQ8WVC6 231 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 PIH1D2Q8WWB5 315 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 SLC44A1Q8WWI5 657 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 OR8D1Q8WZ84 308 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 COL26A1Q96A83 441 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 PGM2Q96G03 612 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 DNAJC1Q96KC8 554 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 ZNF641Q96N77 438 aaPredicted RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 KLHL32Q96NJ5 620 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 DHRS4Q9BTZ2 278 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 CPEB1Q9BZB8 566 aaKnown RBP9.37□□□□□ -0.91
TPM3-218ENST00000505010 SUV39H2Q9H5I1 410 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 UGT1A7Q9HAW7 530 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 UGT1A10Q9HAW8 530 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 UGT1A8Q9HAW9 530 aa9.37□□□□□ -0.91
TPM3-218ENST00000505010 HEBP1Q9NRV9 189 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms