RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 NFATC4Q14934 902 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 NOMO1Q15155 1222 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 PCSK7Q16549 785 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 LRRC66Q68CR7 880 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 AADACL2Q6P093 401 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 MACC1Q6ZN28 852 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 Q6ZVL8 140 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 KANSL1Q7Z3B3 1105 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 RD3Q7Z3Z2 195 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 SLCO6A1Q86UG4 719 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 PNPLA1Q8N8W4 532 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 PLA2G15Q8NCC3 412 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 SMIM14Q96QK8 99 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 HERPUD2Q9BSE4 406 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 SLC13A1Q9BZW2 595 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 UCKL1Q9NWZ5 548 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 SPASTQ9UBP0 616 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 KLF15Q9UIH9 416 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 OR1A2Q9Y585 309 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 CAPN6Q9Y6Q1 641 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 DNAH14Q0VDD8 3507 aa12.81□□□□□ -0.36
HSPG2-213ENST00000498495 TP53BP1Q12888 1972 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 A0A0U1RQS6 177 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 GOLGA6BA6NDN3 693 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 PDE2AO00408 941 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 ENC1O14682 589 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 SCAMP1O15126 338 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 FFAR2O15552 330 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 PMPCBO75439 489 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CLDN7O95471 211 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 MT-CYBP00156 380 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TNFP01375 233 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 RBP3P10745 1247 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CTSEP14091 401 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TSHRP16473 764 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 KELP23276 732 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 RBL1P28749 1068 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TRIM23P36406 574 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 EIF3EP60228 445 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CCZ1BP86790 482 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CCZ1P86791 482 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CDK18Q07002 472 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 SLC14A2Q15849 920 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 QPCTQ16769 361 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CCDC157Q569K6 752 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 ESRP1Q6NXG1 681 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 DARS2Q6PI48 645 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TECPR1Q7Z6L1 1165 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 HID1Q8IV36 788 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 PHACTR4Q8IZ21 702 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 ZNF567Q8N184 647 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CHCHD4Q8N4Q1 142 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TTC13Q8NBP0 860 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 SPATA22Q8NHS9 363 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CCHCR1Q8TD31 782 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 LMX1AQ8TE12 382 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 ANP32BQ92688 251 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TSACCQ96A04 125 aaPredicted RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 FUBP1Q96AE4 644 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 DTD2Q96FN9 168 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 HES6Q96HZ4 224 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 WDR92Q96MX6 357 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 QKIQ96PU8 341 aaKnown RBP eCLIP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 DUSP23Q9BVJ7 150 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CAAP1Q9H8G2 361 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 C10orf88Q9H8K7 445 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 LZTFL1Q9NQ48 299 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 UBP1Q9NZI7 540 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 APOBEC3BQ9UH17 382 aaKnown RBP12.8□□□□□ -0.36
HSPG2-213ENST00000498495 FAM153AQ9UHL3 310 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 TRHDEQ9UKU6 1024 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 ANGPTL2Q9UKU9 493 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CSNK1G3Q9Y6M4 447 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 CABIN1Q9Y6J0 2220 aa12.8□□□□□ -0.36
HSPG2-213ENST00000498495 C1orf232A0A0U1RR37 186 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 CAPN8A6NHC0 703 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 TRIM38O00635 465 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 AQP9O43315 295 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 SIGLEC6O43699 453 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 TOP3BO95985 862 aaKnown RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 HOXC4P09017 264 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 NFKB1P19838 968 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 CD68P34810 354 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 TNNT3P45378 269 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 GPR1P46091 355 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 HK3P52790 923 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 SRP54P61011 504 aaKnown RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 DNAJC3Q13217 504 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 C1orf61Q13536 156 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 GALNT3Q14435 633 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 PRRT3Q5FWE3 981 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 RAET1GQ6H3X3 334 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 ZNF662Q6ZS27 426 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 NLRP8Q86W28 1048 aa12.79□□□□□ -0.36
HSPG2-213ENST00000498495 CDKL3Q8IVW4 592 aaPredicted RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 RAVER1Q8IY67 606 aaKnown RBP12.79□□□□□ -0.36
HSPG2-213ENST00000498495 NRSN1Q8IZ57 195 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms