RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 ASAP2O43150 1006 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 KIF1CO43896 1103 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 LDLRP01130 860 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SPARCP09486 303 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 MYZAPP0CAP1 466 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TFPIP10646 304 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ENO3P13929 434 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 ZNF8P17098 575 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 PTPN2P17706 415 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SRD5A1P18405 259 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 CPOXP36551 454 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PBX3P40426 434 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ARL1P40616 181 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 GLIPR1P48060 266 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 GNAQP50148 359 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 EIF3BP55884 814 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 HDAC4P56524 1084 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ACSM2AQ08AH3 577 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TMEM115Q12893 351 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 MYBPHQ13203 477 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 CTTNQ14247 550 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 LPIN1Q14693 890 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 RNPS1Q15287 305 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 MED22Q15528 200 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 HLFQ16534 295 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ALG11Q2TAA5 492 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SETMARQ53H47 684 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 HYIQ5T013 277 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PMS2CLQ68D20 193 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TXNDC8Q6A555 127 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 CDC73Q6P1J9 531 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PXKQ7Z7A4 578 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 NOXA1Q86UR1 476 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PGBD5Q8N414 524 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 POC1AQ8NBT0 407 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ZNF114Q8NC26 417 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ZMIZ2Q8NF64 920 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 GJC3Q8NFK1 279 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 CTCFLQ8NI51 663 aaPredicted RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 ETNPPLQ8TBG4 499 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 BICD2Q8TD16 824 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TMEM18Q96B42 140 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ZC3HAV1LQ96H79 300 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 ZNF333Q96JL9 665 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ADGRG7Q96K78 797 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SLC25A33Q9BSK2 321 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 MSTO1Q9BUK6 570 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 C1QTNF5Q9BXJ0 243 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 ITPAQ9BY32 194 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TKTL2Q9H0I9 626 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SCRT2Q9NQ03 307 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SPATS2LQ9NUQ6 558 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 NDRG3Q9UGV2 375 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 INTS6Q9UL03 887 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 AGO1Q9UL18 857 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 CARD8Q9Y2G2 431 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 FAM96BQ9Y3D0 163 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 PSAT1Q9Y617 370 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SCINQ9Y6U3 715 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 SNED1Q8TER0 1413 aa2.47□□□□□ -2.01
RBM39-242ENST00000498280 TDRD9Q8NDG6 1382 aaKnown RBP2.47□□□□□ -2.01
RBM39-242ENST00000498280 A0A0U1RQF3 1178 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 F5H0A9 414 aaPredicted RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 CHL1O00533 1208 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 BCAT2O15382 392 aaPredicted RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 KLK8O60259 260 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 ZG16O60844 167 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 RNASEH2AO75792 299 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 SEC14L2O76054 403 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 RGS11O94810 467 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 DDX58O95786 925 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 TFP02787 698 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 MMP3P08254 477 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 HSPA1AP0DMV8 641 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 HSPA1BP0DMV9 641 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 ITGAXP20702 1163 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 CHMP24386 653 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 MXI1P50539 228 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 RARSP54136 660 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 EIF5P55010 431 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 RPL7AP62424 266 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 OLR1P78380 273 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 SETQ01105 290 aaPredicted RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 CEBPZQ03701 1054 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 FAM27E3Q08E93 113 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 ST3GAL1Q11201 340 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 GSTA3Q16772 222 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 SOWAHAQ2M3V2 549 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 COL28A1Q2UY09 1125 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 C14orf177Q52M58 125 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 PLEKHO1Q53GL0 409 aaPredicted RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 ESCO2Q56NI9 601 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 WDR78Q5VTH9 848 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 HIST2H2BDQ6DRA6 164 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 FBXO46Q6PJ61 603 aaPredicted RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 CPLX2Q6PUV4 134 aaKnown RBP2.46□□□□□ -2.02
RBM39-242ENST00000498280 CYP20A1Q6UW02 462 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 C4orf50Q6ZRC1 276 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 MON1BQ7L1V2 547 aa2.46□□□□□ -2.02
RBM39-242ENST00000498280 DENND6AQ8IWF6 608 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms