RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TIFAQ96CG3 184 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RSPRY1Q96DX4 576 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ASIC4Q96FT7 647 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RPL10LQ96L21 214 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TBATAQ96M53 351 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 ASB16Q96NS5 453 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TUBGCP5Q96RT8 1024 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 NDNQ99608 321 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SLC2A11Q9BYW1 496 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PITPNM3Q9BZ71 974 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 GPR63Q9BZJ6 419 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 NSUN3Q9H649 340 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 IGFLR1Q9H665 355 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 MANSC1Q9H8J5 431 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 SLCO1B3Q9NPD5 702 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 MARCH4Q9P2E8 410 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 DCDC2Q9UHG0 476 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FKBPLQ9UIM3 349 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 TLK1Q9UKI8 766 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 RPL26L1Q9UNX3 145 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 FNDC3AQ9Y2H6 1198 aaKnown RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 USP15Q9Y4E8 981 aaPredicted RBP8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 PCDHB9Q9Y5E1 797 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 NUMA1Q14980 2115 aa8.09□□□□□ -1.11
PDZRN3-212ENST00000498048 C1orf232A0A0U1RR37 186 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 UBA6A0AVT1 1052 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ANKRD66B4E2M5 251 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 TK2O00142 265 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 KLF11O14901 512 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 BIRC5O15392 142 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 CD3EAPO15446 510 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 HTRA2O43464 458 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 AHSGP02765 367 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ASLP04424 464 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 C2P06681 752 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ALPIP09923 528 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SLC35E2BP0CK96 405 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ARSAP15289 507 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 HOXB8P17481 243 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 GABRB3P28472 473 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 GKP32189 559 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 MC4RP32245 332 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 VIPR2P41587 438 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 RECQLP46063 649 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LEPRP48357 1165 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 POLD2P49005 469 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 DGKGP49619 791 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ECT2LQ008S8 904 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 KDSRQ06136 332 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 RAD51Q06609 339 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 KCNC3Q14003 757 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SEMA3AQ14563 771 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 DHCR24Q15392 516 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 TSNAXIP1Q2TAA8 658 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ACCSLQ4AC99 568 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ZNF789Q5FWF6 425 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 PPM1JQ5JR12 505 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 AARS2Q5JTZ9 985 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 FAM78AQ5JUQ0 283 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 RNF187Q5TA31 235 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 HECTD2Q5U5R9 776 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 DMRTA1Q5VZB9 504 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 TRIM68Q6AZZ1 485 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LRRC8EQ6NSJ5 796 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 Q6ZVU0 165 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 USP45Q70EL2 814 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 OTOAQ7RTW8 1153 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LYSMD3Q7Z3D4 306 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 CCDC91Q7Z6B0 441 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 TBC1D1Q86TI0 1168 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LDB1Q86U70 411 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LCA5Q86VQ0 697 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 CAMK1DQ8IU85 385 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 NUDCD3Q8IVD9 361 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 MFSD6LQ8IWD5 586 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 PLD6Q8N2A8 252 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 NAT16Q8N8M0 369 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 MDGA1Q8NFP4 955 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 GPR150Q8NGU9 434 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 OR4L1Q8NH43 312 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 GRIN3AQ8TCU5 1115 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 KCTD4Q8WVF5 259 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 FGF13Q92913 245 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SMARCD2Q92925 531 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 E2F7Q96AV8 911 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 ISG20Q96AZ6 181 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SCYL1Q96KG9 808 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SMIM14Q96QK8 99 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 GDF15Q99988 308 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 PLCD4Q9BRC7 762 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 CIPCQ9C0C6 399 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 CCDC68Q9H2F9 335 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 LINC00597Q9H2U6 94 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SUDS3Q9H7L9 328 aaPredicted RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 NPHS2Q9NP85 383 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 INTS10Q9NVR2 710 aaKnown RBP8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 TMEM216Q9P0N5 145 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 SIRPGQ9P1W8 387 aa8.08□□□□□ -1.12
PDZRN3-212ENST00000498048 XPR1Q9UBH6 696 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms