RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 TPCN2Q8NHX9 752 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 NSMCE1Q8WV22 266 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PIH1D2Q8WWB5 315 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 CTNNBL1Q8WYA6 563 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 MAML1Q92585 1016 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 CCDC74AQ96AQ1 378 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 DTD2Q96FN9 168 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 BBC3Q96PG8 261 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 POLR1BQ9H9Y6 1135 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 GULP1Q9UBP9 304 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 PHTF1Q9UMS5 762 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 DOLKQ9UPQ8 538 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 SATB2Q9UPW6 733 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 RAI2Q9Y5P3 530 aa14.29□□□□□ -0.12
VTI1A-209ENST00000496445 ZFC3H1O60293 1989 aaKnown RBP14.29□□□□□ -0.12
VTI1A-209ENST00000496445 BAHCC1Q9P281 2608 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 SSU72P8A0A1W2PR75 194 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PSMD11O00231 422 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TNFRSF10CO14798 259 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TPM3P06753 285 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 H2AFZP0C0S5 128 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TMEM253P0C7T8 217 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 CYP2A6P11509 494 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 MYCLP1P12525 358 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 CTPS1P17812 591 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 LSSP48449 732 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 GBE1Q04446 702 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 CCDC173Q0VFZ6 552 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TRIM14Q14142 442 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 C3orf38Q5JPI3 329 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 ARMC12Q5T9G4 340 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 DENND2CQ68D51 928 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 LRRC69Q6ZNQ3 347 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 H2AFVQ71UI9 128 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 LRRC49Q8IUZ0 686 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 VSTM4Q8IW00 320 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 SDR16C5Q8N3Y7 309 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 KCTD6Q8NC69 237 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 GPR156Q8NFN8 814 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 CCL4L1Q8NHW4 92 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PTCD2Q8WV60 388 aaKnown RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 SCG3Q8WXD2 468 aaKnown RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 SCRN2Q96FV2 425 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PRR11Q96HE9 360 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 ZNF578Q96N58 590 aaPredicted RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 SEMA3CQ99985 751 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TEX101Q9BY14 249 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 POLR1EQ9GZS1 481 aaKnown RBP14.28□□□□□ -0.12
VTI1A-209ENST00000496445 TMEM168Q9H0V1 697 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PRORYQ9H606 182 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 ABHD10Q9NUJ1 306 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PPIL1Q9Y3C6 166 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 CFAP46Q8IYW2 2715 aa14.28□□□□□ -0.12
VTI1A-209ENST00000496445 PRSS38A1L453 326 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 MATN3O15232 486 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 RRP8O43159 456 aaKnown RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 NOBOXO60393 691 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 MFAP3LO75121 409 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 SOD1P00441 154 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 FUCA1P04066 466 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 HLA-DQB2P05538 268 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 KELP23276 732 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 MAN1A1P33908 653 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 PCBP4P57723 403 aaKnown RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 DSC2Q02487 901 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 TLE3Q04726 772 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 SLC10A2Q12908 348 aaPredicted RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 PDK2Q15119 407 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 IGF2-ASQ6U949 168 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 RFLNAQ6ZTI6 216 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 Q6ZVL8 140 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 USP45Q70EL2 814 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 TECPR1Q7Z6L1 1165 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 HEATR4Q86WZ0 1026 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 SPACA3Q8IXA5 215 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 OR8K1Q8NGG5 319 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 WDR48Q8TAF3 677 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 RAPGEF5Q92565 580 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 FATE1Q969F0 183 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 CHP1Q99653 195 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 FRMD8Q9BZ67 464 aaPredicted RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 SYNDIG1Q9H7V2 258 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 CYP4F12Q9HCS2 524 aa14.27□□□□□ -0.13
VTI1A-209ENST00000496445 GCN1Q92616 2671 aaKnown RBP14.27□□□□□ -0.13
VTI1A-209ENST00000496445 A0A0J9YYE9 177 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 A0A1W2PQM1 296 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 CBFA2T2O43439 604 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 TRBC1P01850 177 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 CEACAM5P06731 702 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 KRT7P08729 469 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 CDK3Q00526 305 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 ITKQ08881 620 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 NIPAL4Q0D2K0 466 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 ARHGEF7Q14155 803 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 SPIDRQ14159 915 aa14.26□□□□□ -0.13
VTI1A-209ENST00000496445 IFI16Q16666 785 aaKnown RBP14.26□□□□□ -0.13
VTI1A-209ENST00000496445 SKOR2Q2VWA4 1001 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms