RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 ZNF638Q14966 1978 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 SPTBN1Q01082 2364 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 B8ZZF3 427 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 E9PLN8 166 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 K7ENM7 598 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 LAD1O00515 517 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PIRO00625 290 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 OGTO15294 1046 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 TEX33O43247 280 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CBFA2T3O75081 653 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 GJB3O75712 270 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 EGFP01133 1207 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CLTAP09496 248 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 RAP2AP10114 183 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PIM1P11309 404 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 ODC1P11926 461 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 ARSAP15289 507 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PECAM1P16284 738 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 CYP3A5P20815 502 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 FDXRP22570 491 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 GABRR2P28476 465 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 NMT1P30419 496 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 SSTR4P31391 388 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 ABCG1P45844 678 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 LILRA4P59901 499 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PSMC1P62191 440 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 HMGN5P82970 282 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 HGFACQ04756 655 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CUL4BQ13620 913 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PDIA5Q14554 519 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 TRIP6Q15654 476 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 ZNF77Q15935 545 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CYP4A22Q5TCH4 519 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PPP1R32Q7Z5V6 425 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 DNAJB7Q7Z6W7 309 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 PDSS2Q86YH6 399 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 IGDCC3Q8IVU1 814 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CCDC28AQ8IWP9 274 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 ELMOD1Q8N336 334 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 MPP5Q8N3R9 675 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 SYT2Q8N9I0 419 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 LSM14AQ8ND56 463 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 BPIFB1Q8TDL5 484 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 SNRNP27Q8WVK2 155 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 THAP4Q8WY91 577 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CENPIQ92674 756 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 HDAC2Q92769 488 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 SPSB4Q96A44 273 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 FAM84AQ96KN4 292 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 KCNC2Q96PR1 638 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 FNBP1Q96RU3 617 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PRPF18Q99633 342 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 VKORC1Q9BQB6 163 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 MRI1Q9BV20 369 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 TPSD1Q9BZJ3 242 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 TINAGL1Q9GZM7 467 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 TWSG1Q9GZX9 223 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 PCDHAC1Q9H158 963 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 SLITRK6Q9H5Y7 841 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 TASP1Q9H6P5 420 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 C8orf33Q9H7E9 229 aaPredicted RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 SAYSD1Q9NPB0 183 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 FBXO34Q9NWN3 711 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 KCND2Q9NZV8 630 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CFAP97Q9P2B7 532 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 ANKMY1Q9P2S6 941 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 CPSF3Q9UKF6 684 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 ODF2LQ9ULJ1 636 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 NOL7Q9UMY1 257 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 MTO1Q9Y2Z2 717 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 DTNAQ9Y4J8 743 aa4.47□□□□□ -1.69
VPS52-222ENST00000495981 NYNRINQ9P2P1 1898 aaKnown RBP4.47□□□□□ -1.69
VPS52-222ENST00000495981 PTPRJQ12913 1337 aa4.46□□□□□ -1.69
VPS52-222ENST00000495981 COL5A1P20908 1838 aaPredicted RBP4.46□□□□□ -1.69
VPS52-222ENST00000495981 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 MYOCOSA0A1B0GUC4 107 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ZNF785A8K8V0 405 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 LACTBL1A8MY62 500 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 ANKRD63C9JTQ0 380 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 FCHO1O14526 889 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 KIAA0391O15091 583 aaKnown RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 CLDN3O15551 220 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 DHHO43323 396 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 HCRTO43612 131 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 SLC28A2O43868 658 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 GFPT2O94808 682 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 NOL4O94818 638 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 RHOBTB1O94844 696 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ATXN1LP0C7T5 689 aaKnown RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 PLA2G4BP0C869 781 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 VSIG10L2P0DP72 767 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 HAPLN1P10915 354 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 ZNF28P17035 718 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 MST1P26927 711 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 ACVR2AP27037 513 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 CDC25CP30307 473 aa4.46□□□□□ -1.7
VPS52-222ENST00000495981 DHPSP49366 369 aaPredicted RBP4.46□□□□□ -1.7
VPS52-222ENST00000495981 LIG4P49917 911 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms