RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 ZNF30P17039 623 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 NFKB1P19838 968 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 LHCGRP22888 699 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 ETV3P41162 512 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 CDK18Q07002 472 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 GALNT3Q14435 633 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 CRTC1Q6UUV9 634 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 HSD11B1LQ7Z5J1 315 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 ZNF567Q8N184 647 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 PLA2G15Q8NCC3 412 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 ATL2Q8NHH9 583 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 SMIM14Q96QK8 99 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 GPR27Q9NS67 375 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 UBP1Q9NZI7 540 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 FTSJ1Q9UET6 329 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 FAM153AQ9UHL3 310 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 RSPH14Q9UHP6 348 aa15.95■□□□□ 0.14
LIME1-209ENST00000494776 TP53BP1Q12888 1972 aaPredicted RBP15.95■□□□□ 0.14
LIME1-209ENST00000494776 A0A0U1RQS6 177 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 C1orf232A0A0U1RR37 186 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 CACNB4O00305 520 aaPredicted RBP15.94■□□□□ 0.14
LIME1-209ENST00000494776 KCNN4O15554 427 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 ZNF189O75820 626 aaPredicted RBP15.94■□□□□ 0.14
LIME1-209ENST00000494776 CSF2P04141 144 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 JUNDP17535 347 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 CD68P34810 354 aaPredicted RBP15.94■□□□□ 0.14
LIME1-209ENST00000494776 SLC14A2Q15849 920 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 QPCTQ16769 361 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 TPRG1LQ5T0D9 272 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 FAXCQ5TGI0 409 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 MEI1Q5TIA1 1274 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 ITPRIPL1Q6GPH6 555 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 PNCKQ6P2M8 343 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 ENPP7Q6UWV6 458 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 MACC1Q6ZN28 852 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 Q6ZVL8 140 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 TRIM58Q8NG06 486 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 CCHCR1Q8TD31 782 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 BTN2A2Q8WVV5 523 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 DTD2Q96FN9 168 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 SLC13A1Q9BZW2 595 aa15.94■□□□□ 0.14
LIME1-209ENST00000494776 CNOT1A5YKK6 2376 aaKnown RBP15.94■□□□□ 0.14
LIME1-209ENST00000494776 NEMP2A6NFY4 417 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 FFAR2O15552 330 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 PIAS2O75928 621 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 CLDN7O95471 211 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 LDOC1O95751 146 aaPredicted RBP15.93■□□□□ 0.14
LIME1-209ENST00000494776 ADRB1P08588 477 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 ALPPL2P10696 532 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 NME1P15531 152 aaKnown RBP15.93■□□□□ 0.14
LIME1-209ENST00000494776 GM2AP17900 193 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 DGKAP23743 735 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 BLKP51451 505 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 PPARDQ03181 441 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 PTSQ03393 145 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 EIF2B5Q13144 721 aaKnown RBP15.93■□□□□ 0.14
LIME1-209ENST00000494776 NFATC4Q14934 902 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 RAET1GQ6H3X3 334 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 ESRP1Q6NXG1 681 aaKnown RBP15.93■□□□□ 0.14
LIME1-209ENST00000494776 WDR92Q96MX6 357 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 FCRL5Q96RD9 977 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 WDR26Q9H7D7 661 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 UCKL1Q9NWZ5 548 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 KLQ9UEF7 1012 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 CD84Q9UIB8 345 aa15.93■□□□□ 0.14
LIME1-209ENST00000494776 APOBEC2Q9Y235 224 aaKnown RBP15.93■□□□□ 0.14
LIME1-209ENST00000494776 PDE2AO00408 941 aaPredicted RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 TNFSF14O43557 240 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 NDST3O95803 873 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 CTSEP14091 401 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 TSHRP16473 764 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 KELP23276 732 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 GPR1P46091 355 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 WNT3AP56704 352 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 FOXC1Q12948 553 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 PRPSAP1Q14558 356 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 CCDC157Q569K6 752 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 RD3Q7Z3Z2 195 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 GLRX5Q86SX6 157 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 HID1Q8IV36 788 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 PHACTR4Q8IZ21 702 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 CBARPQ8N350 705 aaPredicted RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 SLC25A45Q8N413 288 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 BAHD1Q8TBE0 780 aaPredicted RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 LMX1AQ8TE12 382 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 TSACCQ96A04 125 aaPredicted RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 FUBP1Q96AE4 644 aaKnown RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 TADA1Q96BN2 335 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 AP2M1Q96CW1 435 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 CNDP2Q96KP4 475 aaKnown RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 TRIB3Q96RU7 358 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 LYSMD1Q96S90 227 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 FSD1LQ9BXM9 530 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 GBA3Q9H227 469 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 PHPT1Q9NRX4 125 aaPredicted RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 PKD2L2Q9NZM6 624 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 SPASTQ9UBP0 616 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 APOBEC3BQ9UH17 382 aaKnown RBP15.92■□□□□ 0.14
LIME1-209ENST00000494776 KLF15Q9UIH9 416 aa15.92■□□□□ 0.14
LIME1-209ENST00000494776 MOSPD1Q9UJG1 213 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms