RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 LRIG1Q96JA1 1093 aa20.64■□□□□ 0.89
KPNA1-210ENST00000494339 ZFYVE1Q9HBF4 777 aa20.64■□□□□ 0.89
KPNA1-210ENST00000494339 SARDHQ9UL12 918 aa20.64■□□□□ 0.89
KPNA1-210ENST00000494339 RIMKLBQ9ULI2 386 aa20.64■□□□□ 0.89
KPNA1-210ENST00000494339 FNDC3AQ9Y2H6 1198 aaKnown RBP20.64■□□□□ 0.89
KPNA1-210ENST00000494339 CCDC162PA2VCL2 907 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 STX7O15400 261 aaKnown RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SLC7A4O43246 635 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 KRT37O76014 449 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 CLDN7O95471 211 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 GOT2P00505 430 aaKnown RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 TIE1P35590 1138 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 TNFRSF4P43489 277 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 POLR2LP62875 67 aaKnown RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 PDE1BQ01064 536 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 ELAVL3Q14576 367 aaKnown RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 ZNF805Q5CZA5 627 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 LGSNQ5TDP6 509 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 TSPAN33Q86UF1 283 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 CNTN4Q8IWV2 1026 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 NDUFAF2Q8N183 169 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 DNASE1L2Q92874 299 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SCRN2Q96FV2 425 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 FAM167BQ9BTA0 163 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 MFSD1Q9H3U5 465 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 STON1Q9Y6Q2 735 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 A0A1W2PQ67 120 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 HMX2A2RU54 273 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 KPNA3O00505 521 aaPredicted RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 KRT38O76015 456 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SNRPAP09012 282 aaKnown RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 CHN1P15882 459 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 LSP1P33241 339 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 HMGCLP35914 325 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SLC1A2P43004 574 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 KIR2DL1P43626 348 aaPredicted RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SERPINB9P50453 376 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 MPP1Q00013 466 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 UGP2Q16851 508 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 PNPLA1Q8N8W4 532 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 SPOCK2Q92563 424 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 KLF6Q99612 283 aaPredicted RBP20.63■□□□□ 0.89
KPNA1-210ENST00000494339 PKP3Q9Y446 797 aa20.63■□□□□ 0.89
KPNA1-210ENST00000494339 BPTFQ12830 3046 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 EGFP01133 1207 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 PRNPP04156 253 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 HNRNPLP14866 589 aaKnown RBP eCLIP20.62■□□□□ 0.896e-7■■■■■ 34.8
KPNA1-210ENST00000494339 METAP1P53582 386 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 CDKN3Q16667 212 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 GRTP1Q5TC63 336 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 TTC19Q6DKK2 380 aaPredicted RBP20.62■□□□□ 0.89
KPNA1-210ENST00000494339 C4orf33Q8N1A6 199 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 MCCC1Q96RQ3 725 aaPredicted RBP20.62■□□□□ 0.89
KPNA1-210ENST00000494339 SMC6Q96SB8 1091 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 FAM129BQ96TA1 746 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 RBBP8Q99708 897 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 C8orf33Q9H7E9 229 aaPredicted RBP20.62■□□□□ 0.89
KPNA1-210ENST00000494339 PRSS16Q9NQE7 514 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 PRDM6Q9NQX0 595 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 IL17CQ9P0M4 197 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 MARCH4Q9P2E8 410 aaPredicted RBP20.62■□□□□ 0.89
KPNA1-210ENST00000494339 SUN2Q9UH99 717 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 FKBPLQ9UIM3 349 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 PPIL1Q9Y3C6 166 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 VCANP13611 3396 aa20.62■□□□□ 0.89
KPNA1-210ENST00000494339 TMEM120BA0PK00 339 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 C16orf96A6NNT2 1141 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 GOLGA8RI6L899 631 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 MT-ND3P03897 115 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 ITGA2BP08514 1039 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 SLC18A1P54219 525 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 C2orf27AQ580R0 203 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 LRRC66Q68CR7 880 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 FSTL4Q6MZW2 842 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 CRTC1Q6UUV9 634 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 TPRG1Q6ZUI0 275 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 LDB1Q86U70 411 aaPredicted RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 PIP4K2CQ8TBX8 421 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 MDM1Q8TC05 714 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 CALML6Q8TD86 181 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 LYSMD1Q96S90 227 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 SRPK1Q96SB4 655 aaKnown RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 SSU72Q9NP77 194 aaKnown RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 KCNK9Q9NPC2 374 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 INTS9Q9NV88 658 aaKnown RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 NSMCE4AQ9NXX6 385 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 FBXO5Q9UKT4 447 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 PPM1HQ9ULR3 514 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 SMG5Q9UPR3 1016 aaKnown RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 TSPAN11A1L157 253 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 IL1BP01584 269 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 TIMP2P16035 220 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 KRT4P19013 534 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 LHCGRP22888 699 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 GABRB3P28472 473 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 TMEM196Q5HYL7 178 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 TTC7BQ86TV6 843 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 C2CD4AQ8NCU7 369 aaPredicted RBP20.61■□□□□ 0.89
KPNA1-210ENST00000494339 OR4L1Q8NH43 312 aa20.61■□□□□ 0.89
KPNA1-210ENST00000494339 SERAC1Q96JX3 654 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms