RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 RBFAQ8N0V3 343 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 SPATA22Q8NHS9 363 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 ACTL9Q8TC94 416 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 HTR3CQ8WXA8 447 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 TADA1Q96BN2 335 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 NUS1Q96E22 293 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 DTD2Q96FN9 168 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 HES6Q96HZ4 224 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 TCEAL2Q9H3H9 227 aaPredicted RBP16.17■□□□□ 0.18
SATB1-217ENST00000493952 C10orf88Q9H8K7 445 aa16.17■□□□□ 0.18
SATB1-217ENST00000493952 RPL26L1Q9UNX3 145 aaKnown RBP16.17■□□□□ 0.18
SATB1-217ENST00000493952 SPEGQ15772 3267 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 ANKRD66B4E2M5 251 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 H3BM21 787 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 MTSS1O43312 755 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 TNFSF14O43557 240 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 MT-CYBP00156 380 aaPredicted RBP16.16■□□□□ 0.18
SATB1-217ENST00000493952 C1SP09871 688 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 CCDC175P0C221 793 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 GIMD1P0DJR0 217 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 JUNDP17535 347 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 NFKB1P19838 968 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 CETN2P41208 172 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 HNRNPKP61978 463 aaKnown RBP eCLIP16.16■□□□□ 0.18
SATB1-217ENST00000493952 NFATC4Q14934 902 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 SLC14A2Q15849 920 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 PCSK7Q16549 785 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 QPCTQ16769 361 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 Q6ZVL8 140 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 ZNF567Q8N184 647 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 PNPLA1Q8N8W4 532 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 ZNF548Q8NEK5 533 aaPredicted RBP16.16■□□□□ 0.18
SATB1-217ENST00000493952 FUBP1Q96AE4 644 aaKnown RBP16.16■□□□□ 0.18
SATB1-217ENST00000493952 CNDP2Q96KP4 475 aaKnown RBP16.16■□□□□ 0.18
SATB1-217ENST00000493952 TRIB3Q96RU7 358 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 FAM118BQ9BPY3 351 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 KLHL8Q9P2G9 620 aaPredicted RBP16.16■□□□□ 0.18
SATB1-217ENST00000493952 WASF3Q9UPY6 502 aa16.16■□□□□ 0.18
SATB1-217ENST00000493952 H7C0C1 242 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 TRIM38O00635 465 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 FFAR2O15552 330 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 TJP3O95049 919 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 LDOC1O95751 146 aaPredicted RBP16.15■□□□□ 0.18
SATB1-217ENST00000493952 ZNF30P17039 623 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 RBL1P28749 1068 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 ATP5OP48047 213 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 PTSQ03393 145 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 ENPP7Q6UWV6 458 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 RFLNAQ6ZTI6 216 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 KDELC2Q7Z4H8 507 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 TECPR1Q7Z6L1 1165 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 PHACTR4Q8IZ21 702 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 LYSMD1Q96S90 227 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 VAT1Q99536 393 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 ADGRE3Q9BY15 652 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 CD84Q9UIB8 345 aa16.15■□□□□ 0.18
SATB1-217ENST00000493952 APOBEC2Q9Y235 224 aaKnown RBP16.15■□□□□ 0.18
SATB1-217ENST00000493952 COL27A1Q8IZC6 1860 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 F5H423 210 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 ENC1O14682 589 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 SIGLEC6O43699 453 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 HYAL3O43820 417 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 DKK1O94907 266 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 CLDN7O95471 211 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 RBP3P10745 1247 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 SPINK2P20155 84 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 HTR1BP28222 390 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 TRIM23P36406 574 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 STC1P52823 247 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 KIAA1024LP59773 190 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 EIF3EP60228 445 aaKnown RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 DNAJC3Q13217 504 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 CDKN3Q16667 212 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 ALG11Q2TAA5 492 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 KCTD16Q68DU8 428 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 PNCKQ6P2M8 343 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 ZNF662Q6ZS27 426 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 CDKL3Q8IVW4 592 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 OR4C6Q8NH72 309 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 BTN2A2Q8WVV5 523 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 ADAMTS14Q8WXS8 1223 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 TSACCQ96A04 125 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 PDXPQ96GD0 296 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 WDR92Q96MX6 357 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 MLPHQ9BV36 600 aaPredicted RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 LRRC61Q9BV99 259 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 LGR4Q9BXB1 951 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 ABCG8Q9H221 673 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 WDR26Q9H7D7 661 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 KCTD5Q9NXV2 234 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 UBP1Q9NZI7 540 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 APOBEC3BQ9UH17 382 aaKnown RBP16.14■□□□□ 0.17
SATB1-217ENST00000493952 ANGPTL2Q9UKU9 493 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 DNPEPQ9ULA0 475 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 RP1P56715 2156 aa16.14■□□□□ 0.17
SATB1-217ENST00000493952 ASXL3Q9C0F0 2248 aa16.13■□□□□ 0.17
SATB1-217ENST00000493952 C1orf232A0A0U1RR37 186 aa16.13■□□□□ 0.17
SATB1-217ENST00000493952 TMEM202A6NGA9 273 aa16.13■□□□□ 0.17
SATB1-217ENST00000493952 CACNB4O00305 520 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms