RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PTPRAP18433 802 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 DDI2Q5TDH0 399 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 FBXO42Q6P3S6 717 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 PPCDCQ96CD2 204 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 COPS8Q99627 209 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 HMX1Q9NP08 348 aaPredicted RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 ZNF222Q9UK12 451 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 GIT1Q9Y2X7 761 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 MSCO60682 206 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 CNTD1Q8N815 330 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 ZNF248Q8NDW4 579 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 RBM4BQ9BQ04 359 aaKnown RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 RBM4Q9BWF3 364 aaKnown RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 BRD9Q9H8M2 597 aa20.14■□□□□ 0.81
RNF40-203ENST00000493683 IFT80Q9P2H3 777 aaPredicted RBP20.14■□□□□ 0.81
RNF40-203ENST00000493683 SH3BGRLO75368 114 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 CCR3P51677 355 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 KLF10Q13118 480 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 AKAP14Q86UN6 197 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 PCDH18Q9HCL0 1135 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 SLCO1B3Q9NPD5 702 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 MRPS7Q9Y2R9 242 aaKnown RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 PRMT5O14744 637 aaPredicted RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 NADKO95544 446 aaPredicted RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 LINC00032P0C843 101 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 CTSEP14091 401 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 BMP6P22004 513 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 ADCYAP1R1P41586 468 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 ZNF554Q86TJ5 538 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 CPSF7Q8N684 471 aaKnown RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 CXorf40BQ96DE9 158 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 HSD17B14Q9BPX1 270 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 C3orf14Q9HBI5 128 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 PRR5-ARHGAP8B1AHC4 643 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 PBX1P40424 430 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 STARP49675 285 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 TAS2R40P59535 323 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 ARHGAP8P85298 464 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 RNF44Q7L0R7 432 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 GPC2Q8N158 579 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 OR2T34Q8NGX1 318 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 OR2T3Q8NH03 318 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 SEMA3GQ9NS98 782 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 USP20Q9Y2K6 914 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 OR10H1Q9Y4A9 318 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 FADS3Q9Y5Q0 445 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 A0A0J9YYE9 177 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 TAL1P17542 331 aaPredicted RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 PTP4A2Q12974 167 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 RAET1GQ6H3X3 334 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 CLNKQ7Z7G1 428 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 MCFD2Q8NI22 146 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 GIPC3Q8TF64 312 aa20.13■□□□□ 0.81
RNF40-203ENST00000493683 RERGQ96A58 199 aaPredicted RBP20.13■□□□□ 0.81
RNF40-203ENST00000493683 OR10H2O60403 315 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PQBP1O60828 265 aaKnown RBP20.12■□□□□ 0.81
RNF40-203ENST00000493683 SLC25A12O75746 678 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 INTS6LQ5JSJ4 861 aaKnown RBP20.12■□□□□ 0.81
RNF40-203ENST00000493683 FAM46CQ5VWP2 391 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 DCLRE1AQ6PJP8 1040 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PIH1D2Q8WWB5 315 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 HAVCR1Q96D42 359 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 MAF1Q9H063 256 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PCDHGB3Q9Y5G1 929 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PIK3C2BO00750 1634 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 ASMTP46597 345 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 IKBKEQ14164 716 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 ZNF558Q96NG5 402 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 LGMNQ99538 433 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 EXD2Q9NVH0 621 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 CDH5P33151 784 aaPredicted RBP20.12■□□□□ 0.81
RNF40-203ENST00000493683 WNT3AP56704 352 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 FCHO2Q0JRZ9 810 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 CCDC157Q569K6 752 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 ATG14Q6ZNE5 492 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 GLIS3Q8NEA6 775 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 GLOD4Q9HC38 313 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 ZNF780BQ9Y6R6 833 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 FGBP02675 491 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 HNRNPLP14866 589 aaKnown RBP eCLIP20.12■□□□□ 0.81
RNF40-203ENST00000493683 RPL7AP62424 266 aaKnown RBP20.12■□□□□ 0.81
RNF40-203ENST00000493683 OAFQ86UD1 273 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 KIAA0319LQ8IZA0 1049 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PGAM4Q8N0Y7 254 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 VGLL2Q8N8G2 317 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 FAM47BQ8NA70 645 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 OR4A15Q8NGL6 344 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 COL26A1Q96A83 441 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 P2RY11Q96G91 374 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 WDR18Q9BV38 432 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 PNPOQ9NVS9 261 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.12■□□□□ 0.813e-6■□□□□ 9.8
RNF40-203ENST00000493683 TBL1XO60907 577 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 IFNA16P05015 189 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 THAP5Q7Z6K1 395 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 HDAC10Q969S8 669 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 LRRC4CQ9HCJ2 640 aa20.12■□□□□ 0.81
RNF40-203ENST00000493683 GPN1Q9HCN4 374 aaPredicted RBP20.12■□□□□ 0.81
RNF40-203ENST00000493683 AGLP35573 1532 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms