RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 MMP20O60882 483 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 RPP40O75818 363 aaKnown RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 PIRTP0C851 137 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 HMGCLP35914 325 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 HADHAP40939 763 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 LIG3P49916 1009 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 RPL6Q02878 288 aaKnown RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
LSM2-214ENST00000493387 POU6F1Q14863 301 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 AGERQ15109 404 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 CNGA3Q16281 694 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 SKIDA1Q1XH10 827 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 CERCAMQ5T4B2 595 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 CENPUQ71F23 418 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 LPCAT2Q7L5N7 544 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 LYSMD3Q7Z3D4 306 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 NLRP8Q86W28 1048 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 CBARPQ8N350 705 aaPredicted RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 TTC30BQ8N4P2 665 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 GPR161Q8N6U8 529 aaKnown RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 STYXQ8WUJ0 223 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 IFT81Q8WYA0 676 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.56□□□□□ -0.56
LSM2-214ENST00000493387 WRAP53Q9BUR4 548 aaKnown RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 GPR174Q9BXC1 333 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 C1QTNF2Q9BXJ5 285 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 DUSP15Q9H1R2 295 aaPredicted RBP11.56□□□□□ -0.56
LSM2-214ENST00000493387 CD93Q9NPY3 652 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 DMTF1Q9Y222 760 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 ITM2BQ9Y287 266 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 TCAF1Q9Y4C2 921 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 SPO11Q9Y5K1 396 aa11.56□□□□□ -0.56
LSM2-214ENST00000493387 PRR23AA6NEV1 266 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 IGLON5A6NGN9 336 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 MROH6A6NGR9 719 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 METTL12A8MUP2 240 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 A8MX80 341 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 C10orf142B7Z368 130 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 WNT9AO14904 365 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 TP73O15350 636 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 RHOBTB1O94844 696 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 CLDN7O95471 211 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 PYGLP06737 847 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 C6P13671 934 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 LHCGRP22888 699 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 PSMA3P25788 255 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 MGAT1P26572 445 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 SPINT3P49223 89 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 PTSQ03393 145 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 SEPT6Q14141 434 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ACOX1Q15067 660 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ELF2Q15723 593 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZNF284Q2VY69 593 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 BBS9Q3SYG4 887 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 TMEM259Q4ZIN3 620 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 SETMARQ53H47 684 aaPredicted RBP11.55□□□□□ -0.56
LSM2-214ENST00000493387 CASC4Q6P4E1 433 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZC3H14Q6PJT7 736 aaKnown RBP11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZDHHC24Q6UX98 284 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 CEP68Q76N32 757 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZNF765Q7L2R6 523 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 TSPAN33Q86UF1 283 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZBTB44Q8NCP5 570 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 DTX3LQ8TDB6 740 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 COQ10AQ96MF6 247 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 HINFPQ9BQA5 517 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 KIFC1Q9BW19 673 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 SLC17A9Q9BYT1 436 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 KCNH6Q9H252 994 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 ZDHHC18Q9NUE0 388 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 PIH1D1Q9NWS0 290 aaKnown RBP11.55□□□□□ -0.56
LSM2-214ENST00000493387 IL17CQ9P0M4 197 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 NFKBIL1Q9UBC1 381 aaPredicted RBP11.55□□□□□ -0.56
LSM2-214ENST00000493387 MBD1Q9UIS9 605 aaPredicted RBP11.55□□□□□ -0.56
LSM2-214ENST00000493387 GGT7Q9UJ14 662 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
LSM2-214ENST00000493387 FAM237BA0A1B0GVD1 139 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 E7ESA3 106 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 LATO43561 262 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 LDB2O43679 373 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 LILRB5O75023 590 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 AVILO75366 819 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 RECQL5O94762 991 aaPredicted RBP11.54□□□□□ -0.56
LSM2-214ENST00000493387 FSBPO95073 299 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 TTC4O95801 387 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 C1SP09871 688 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 PAMP19021 973 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 TNFRSF8P28908 595 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 AKT2P31751 481 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 DPP6P42658 865 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 ZNF140P52738 457 aaPredicted RBP11.54□□□□□ -0.56
LSM2-214ENST00000493387 DCDC1P59894 354 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 SEMG2Q02383 582 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 PDIA2Q13087 525 aaKnown RBP11.54□□□□□ -0.56
LSM2-214ENST00000493387 TRADDQ15628 312 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 WDR45BQ5MNZ6 344 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
LSM2-214ENST00000493387 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms