RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 CYLC1P35663 651 aaPredicted RBP17.76■□□□□ 0.43
ITGB1-215ENST00000488494 EPHB1P54762 984 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 E2F1Q01094 437 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 NIPAL4Q0D2K0 466 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 ZBTB17Q13105 803 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 ELOCQ15369 112 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 SPA17Q15506 151 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 C6orf132Q5T0Z8 1188 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 PNCKQ6P2M8 343 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 NPNTQ6UXI9 565 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 SLC35F3Q8IY50 421 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CCDC170Q8IYT3 715 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 OR56A4Q8NGH8 313 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 TPCN2Q8NHX9 752 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 ARRDC2Q8TBH0 407 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 OR1E3Q8WZA6 343 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 NXPE2Q96DL1 559 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 BOCQ9BWV1 1114 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CEP41Q9BYV8 373 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 GOLGA6AQ9NYA3 693 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 SALL4Q9UJQ4 1053 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 DOLKQ9UPQ8 538 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CLCA2Q9UQC9 943 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CHKBQ9Y259 395 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 PCDHA13Q9Y5I0 950 aa17.76■□□□□ 0.43
ITGB1-215ENST00000488494 CPED1A4D0V7 1026 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 TMEM202A6NGA9 273 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 CAPN8A6NHC0 703 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 SOWAHDA6NJG2 315 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 PSMD11O00231 422 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 YY2O15391 372 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 OPA1O60313 960 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 JCHAINP01591 159 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 KRT10P13645 584 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 CTSEP14091 401 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 CES1P23141 567 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 KELP23276 732 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 HADHBP55084 474 aaKnown RBP17.75■□□□□ 0.43
ITGB1-215ENST00000488494 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
ITGB1-215ENST00000488494 CYP4F3Q08477 520 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 AP1B1Q10567 949 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 PDK1Q15118 436 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 LRRC66Q68CR7 880 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 MFSD7Q6UXD7 560 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 Q6ZVL8 140 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 EFL1Q7Z2Z2 1120 aaKnown RBP17.75■□□□□ 0.43
ITGB1-215ENST00000488494 DCBLD1Q8N8Z6 715 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 KYQ8NBH2 561 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 LPCAT1Q8NF37 534 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 MAPK15Q8TD08 544 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 OLFM3Q96PB7 478 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 PANX2Q96RD6 677 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 LGR4Q9BXB1 951 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 MRPL40Q9NQ50 206 aaKnown RBP17.75■□□□□ 0.43
ITGB1-215ENST00000488494 SEPT10Q9P0V9 454 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 SIRPGQ9P1W8 387 aa17.75■□□□□ 0.43
ITGB1-215ENST00000488494 NBEAQ8NFP9 2946 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 A0A0J9YYE9 177 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 PPP1R12AO14974 1030 aaPredicted RBP17.74■□□□□ 0.43
ITGB1-215ENST00000488494 TRBC1P01850 177 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 MYCLP1P12525 358 aaPredicted RBP17.74■□□□□ 0.43
ITGB1-215ENST00000488494 ZFXP17010 805 aaPredicted RBP17.74■□□□□ 0.43
ITGB1-215ENST00000488494 TRIM23P36406 574 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 CD86P42081 329 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 CDKN2BP42772 138 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 MARCKSL1P49006 195 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 FAM182AQ5T1J6 154 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 RAET1GQ6H3X3 334 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 C11orf63Q6NUN7 778 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 CRTC1Q6UUV9 634 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 HEATR4Q86WZ0 1026 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 GAS2L3Q86XJ1 694 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 NDUFAF2Q8N183 169 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 GLMNQ92990 594 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 RBM15Q96T37 977 aaKnown RBP eCLIP17.74■□□□□ 0.43
ITGB1-215ENST00000488494 LUC7LQ9NQ29 371 aaKnown RBP17.74■□□□□ 0.43
ITGB1-215ENST00000488494 DKK4Q9UBT3 224 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 RAXQ9Y2V3 346 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 PPIL1Q9Y3C6 166 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 DGKBQ9Y6T7 804 aa17.74■□□□□ 0.43
ITGB1-215ENST00000488494 MT-CO3P00414 261 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 TNFP01375 233 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 MMP2P08253 660 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 HOXC4P09017 264 aaPredicted RBP17.73■□□□□ 0.43
ITGB1-215ENST00000488494 RPIAP49247 311 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 LLGL1Q15334 1064 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 PERM1Q5SV97 790 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 SPOCD1Q6ZMY3 1216 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 RFLNAQ6ZTI6 216 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 B4GALNT4Q76KP1 1039 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 GKN2Q86XP6 184 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 CBARPQ8N350 705 aaPredicted RBP17.73■□□□□ 0.43
ITGB1-215ENST00000488494 CNTD1Q8N815 330 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 ARL10Q8N8L6 244 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 SCG3Q8WXD2 468 aaKnown RBP17.73■□□□□ 0.43
ITGB1-215ENST00000488494 TEX101Q9BY14 249 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 ABCG4Q9H172 646 aa17.73■□□□□ 0.43
ITGB1-215ENST00000488494 SUDS3Q9H7L9 328 aaPredicted RBP17.73■□□□□ 0.43
ITGB1-215ENST00000488494 PCDH9Q9HC56 1237 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms