RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 C21orf33P30042 268 aaPredicted RBP4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 ADORA2A-AS1P86434 159 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 SLC18A2Q05940 514 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 FAM27E3Q08E93 113 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 BIRC2Q13490 618 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 TAF5Q15542 800 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 ANKRD45Q5TZF3 282 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 C9orf57Q5W0N0 161 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 NAPEPLDQ6IQ20 393 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 PRR5LQ6MZQ0 368 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 PRSS57Q6UWY2 283 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 C16orf82Q7Z2V1 217 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 MCPH1Q8NEM0 835 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 ZMIZ2Q8NF64 920 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 RASSF8Q8NHQ8 419 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 GPT2Q8TD30 523 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 TMED6Q8WW62 240 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 CCT6BQ92526 530 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 RTP4Q96DX8 246 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 LMLNQ96KR4 655 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 SLC25A33Q9BSK2 321 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 GLIS2Q9BZE0 524 aaPredicted RBP4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 CLK4Q9HAZ1 481 aaKnown RBP4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 NOD2Q9HC29 1040 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 SUFUQ9UMX1 484 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 SLC45A1Q9Y2W3 748 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 AKAP11Q9UKA4 1901 aa4.8□□□□□ -1.64
SMARCC1-207ENST00000485833 TONSLQ96HA7 1378 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 LINC01553A4QN01 128 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 CHL1O00533 1208 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 ANP32CO43423 234 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 TCEA3O75764 348 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 SERPINI2O75830 405 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 ZBTB11O95625 1053 aaPredicted RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 CNPP09543 421 aaKnown RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 MAP2K2P36507 400 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 CENPAP49450 140 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 MXI1P50539 228 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 PAPOLAP51003 745 aaKnown RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 CLCN5P51795 746 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 ARSFP54793 590 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 RPL36AP83881 106 aaKnown RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 BNC1Q01954 994 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 FBXO43Q4G163 708 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 HERC6Q8IVU3 1022 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 SUGP1Q8IWZ8 645 aaKnown RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 DNAAF1Q8NEP3 725 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 SH3KBP1Q96B97 665 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 RNF183Q96D59 192 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 TXNDC15Q96J42 360 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 FIZ1Q96SL8 496 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 PTPRHQ9HD43 1115 aa4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
SMARCC1-207ENST00000485833 UBR2Q8IWV8 1755 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 A0A1B0GVM2 712 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 NBNO60934 754 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 CELF2O95319 508 aaKnown RBP4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 WEE2P0C1S8 567 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 ARL4CP56559 192 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 ST3GAL1Q11201 340 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 LPIN1Q14693 890 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 ANKRD1Q15327 319 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 SLC18A3Q16572 532 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 DCAF6Q58WW2 860 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.78□□□□□ -1.645e-9■■■■■ 29
SMARCC1-207ENST00000485833 H1FNTQ75WM6 255 aaPredicted RBP4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 ARMC9Q7Z3E5 817 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 DENND6AQ8IWF6 608 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 NKAPQ8N5F7 415 aaKnown RBP4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 USP38Q8NB14 1042 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 SPATA5Q8NB90 893 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 TMEM170AQ8WVE7 144 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 HSPH1Q92598 858 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 ARPC5LQ9BPX5 153 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 STN1Q9H668 368 aaKnown RBP4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 TMEM51Q9NW97 253 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 NARFQ9UHQ1 456 aa4.78□□□□□ -1.64
SMARCC1-207ENST00000485833 SPTBN5Q9NRC6 3674 aaKnown RBP4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 IGLV5-52A0A0A0MRZ9 124 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 A0A1B0GUV1 79 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 DYTNA2CJ06 578 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 VWA3AA6NCI4 1184 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 SMTNL1A8MU46 457 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 SLC25A17O43808 307 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 CHRM4P08173 479 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 MYF6P23409 242 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 HMGB2P26583 209 aaKnown RBP4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 TTKP33981 857 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 COMPP49747 757 aaPredicted RBP4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 TUBA1BP68363 451 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 COASYQ13057 564 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 SLC39A6Q13433 755 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 CAPSQ13938 189 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 EFR3AQ14156 821 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 GRAMD1BQ3KR37 738 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 PLEKHO1Q53GL0 409 aaPredicted RBP4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 MON1AQ86VX9 555 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 SPATA3Q8NHX4 192 aa4.77□□□□□ -1.65
SMARCC1-207ENST00000485833 RAB40AQ8WXH6 277 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms