RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 PERM1Q5SV97 790 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TPRG1LQ5T0D9 272 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 BRAT1Q6PJG6 821 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SRLQ86TD4 932 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 LRRC8AQ8IWT6 810 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 RBFAQ8N0V3 343 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 PQLC3Q8N755 202 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ACRBPQ8NEB7 543 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SNRNP27Q8WVK2 155 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ASB12Q8WXK4 309 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 MAML1Q92585 1016 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ANP32BQ92688 251 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 PRR11Q96HE9 360 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 MGME1Q9BQP7 344 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 TRIM4Q9C037 500 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 FAM117AQ9C073 453 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ATP13A3Q9H7F0 1226 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 ETNK2Q9NVF9 386 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 NCKIPSDQ9NZQ3 722 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SALL4Q9UJQ4 1053 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 PCDHA3Q9Y5H8 950 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 FADS3Q9Y5Q0 445 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 HEMK1Q9Y5R4 338 aaPredicted RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CSNK1G3Q9Y6M4 447 aa10.06□□□□□ -0.8
CPSF4-213ENST00000484112 SETXQ7Z333 2677 aaKnown RBP10.06□□□□□ -0.8
CPSF4-213ENST00000484112 CFAP69A5D8W1 941 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 RCCD1A6NED2 376 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 IGLON5A6NGN9 336 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 C16orf96A6NNT2 1141 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PPP1R12AO14974 1030 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 MATN3O15232 486 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 MFSD11O43934 449 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 SOCS5O75159 536 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 UGT2B4P06133 528 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PTPN7P35236 360 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 CDKN2BP42772 138 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 MMP13P45452 471 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 RPIAP49247 311 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PPIDQ08752 370 aaKnown RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 SLC10A7Q0GE19 358 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 ELP6Q0PNE2 266 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 EIF2B5Q13144 721 aaKnown RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 CLN3Q13286 438 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PDK1Q15118 436 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PRRT3Q5FWE3 981 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 ALG1LQ6GMV1 187 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 IGF2-ASQ6U949 168 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 CPNE8Q86YQ8 564 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PLD5Q8N7P1 536 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 LRRC57Q8N9N7 239 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 TSEN2Q8NCE0 465 aaKnown RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 WDR36Q8NI36 951 aaKnown RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 GLMNQ92990 594 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 VOPP1Q96AW1 172 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 GRAMD1AQ96CP6 724 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 NUDCD1Q96RS6 583 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 POLR1EQ9GZS1 481 aaKnown RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 LACRTQ9GZZ8 138 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 TCEAL2Q9H3H9 227 aaPredicted RBP10.05□□□□□ -0.8
CPSF4-213ENST00000484112 SUV39H2Q9H5I1 410 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 DTLQ9NZJ0 730 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 SPASTQ9UBP0 616 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 PCDHGA8Q9Y5G5 932 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 ACTL7AQ9Y615 435 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 ZNF462Q96JM2 2506 aa10.05□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC187A0A096LP49 1063 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CDRT15L2A8MXV6 281 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 AGRPO00253 132 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 TOR1BO14657 336 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 TPP1O14773 563 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 AREL1O15033 823 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 MTSS1O43312 755 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 GCATO75600 419 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 TCEA3O75764 348 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ANXA6P08133 673 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CCDC175P0C221 793 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CR2P20023 1033 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 GKP32189 559 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 DEKP35659 375 aaKnown RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 THOP1P52888 689 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 RWDD2BP57060 319 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 SKOR1P84550 965 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 BCL2L1Q07817 233 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 SPIDRQ14159 915 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 TCEA2Q15560 299 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 C6orf132Q5T0Z8 1188 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 CFAP58Q5T655 872 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ATXN7L2Q5T6C5 722 aaPredicted RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 FAXCQ5TGI0 409 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 LEKR1Q6ZMV7 388 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 SPOCD1Q6ZMY3 1216 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 ARHGAP36Q6ZRI8 547 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 USP53Q70EK8 1073 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 PARS2Q7L3T8 475 aaKnown RBP10.04□□□□□ -0.8
CPSF4-213ENST00000484112 TTC7BQ86TV6 843 aa10.04□□□□□ -0.8
CPSF4-213ENST00000484112 JAMLQ86YT9 394 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms