RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 A0A0J9YYE9 177 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 GCATO75600 419 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 ZRANB2O95218 330 aaKnown RBP eCLIP13.89□□□□□ -0.19
VARS-225ENST00000482996 TRBC1P01850 177 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 TSHRP16473 764 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 ZNF30P17039 623 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 GM2AP17900 193 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 LHCGRP22888 699 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 TRIM23P36406 574 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 CDKN2BP42772 138 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 NAP1L1P55209 391 aaKnown RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 NR0B2Q15466 257 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 NPNTQ6UXI9 565 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 SPOCD1Q6ZMY3 1216 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 DAAM2Q86T65 1068 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 KATNAL2Q8IYT4 538 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 RCOR2Q8IZ40 523 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 SDR16C5Q8N3Y7 309 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 PDCD7Q8N8D1 485 aaKnown RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 OR56A4Q8NGH8 313 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 FUBP1Q96AE4 644 aaKnown RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 RBM41Q96IZ5 413 aaKnown RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 OLFM3Q96PB7 478 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 GOLPH3Q9H4A6 298 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 CCDC86Q9H6F5 360 aaKnown RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 GRPEL1Q9HAV7 217 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 PCDH9Q9HC56 1237 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 PHPT1Q9NRX4 125 aaPredicted RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 SEPT10Q9P0V9 454 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 ZMIZ1Q9ULJ6 1067 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 PNMA8BQ9ULN7 279 aaPredicted RBP13.89□□□□□ -0.19
VARS-225ENST00000482996 TFR2Q9UP52 801 aa13.89□□□□□ -0.19
VARS-225ENST00000482996 PLXNB3Q9ULL4 1909 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 ASPMQ8IZT6 3477 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GOLGA6CA6NDK9 693 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GOLGA6BA6NDN3 693 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 TNFRSF10CO14798 259 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 CST8O60676 142 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GP1BAP07359 652 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GOLGA6DP0CG33 693 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 TGM2P21980 687 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 ETV3P41162 512 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 CD86P42081 329 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 ZBTB17Q13105 803 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 TAZQ16635 292 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 TFDP3Q5H9I0 405 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 KAZNQ674X7 775 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 LRRC66Q68CR7 880 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 LVRNQ6Q4G3 990 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 Q6ZVL8 140 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 HSD11B1LQ7Z5J1 315 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 TSPAN33Q86UF1 283 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GKN2Q86XP6 184 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 MARCH9Q86YJ5 346 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 CCDC50Q8IVM0 306 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 CBARPQ8N350 705 aaPredicted RBP13.88□□□□□ -0.19
VARS-225ENST00000482996 TXLNBQ8N3L3 684 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 LPCAT1Q8NF37 534 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 IFI44Q8TCB0 444 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 BAG1Q99933 345 aaPredicted RBP13.88□□□□□ -0.19
VARS-225ENST00000482996 CLPBQ9H078 707 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 GOLGA6AQ9NYA3 693 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 MOSPD1Q9UJG1 213 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 DGKBQ9Y6T7 804 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 APC2O95996 2303 aa13.88□□□□□ -0.19
VARS-225ENST00000482996 LY6G6EA0A0G2JKS1 128 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CPED1A4D0V7 1026 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 TRABD2BA6NFA1 517 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 TMEM202A6NGA9 273 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CAPN8A6NHC0 703 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 BTNL10A8MVZ5 291 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 YY2O15391 372 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 OPA1O60313 960 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 MYCLP1P12525 358 aaPredicted RBP13.87□□□□□ -0.19
VARS-225ENST00000482996 MYF5P13349 255 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 TEAD1P28347 426 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CDC25BP30305 580 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CLDN6P56747 220 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 SKOR1P84550 965 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 INSM1Q01101 510 aaPredicted RBP13.87□□□□□ -0.19
VARS-225ENST00000482996 TARDBPQ13148 414 aaKnown RBP eCLIP13.87□□□□□ -0.19
VARS-225ENST00000482996 CDKN3Q16667 212 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 C6orf132Q5T0Z8 1188 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 RAET1GQ6H3X3 334 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CRTC1Q6UUV9 634 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 EFL1Q7Z2Z2 1120 aaKnown RBP13.87□□□□□ -0.19
VARS-225ENST00000482996 TECPR1Q7Z6L1 1165 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 KIAA1328Q86T90 577 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 NT5DC3Q86UY8 548 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CACTIN-AS1Q8N1I8 211 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 TFB1MQ8WVM0 346 aaKnown RBP13.87□□□□□ -0.19
VARS-225ENST00000482996 OR1E3Q8WZA6 343 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 P3H4Q92791 437 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 NAT6Q93015 286 aa13.87□□□□□ -0.19
VARS-225ENST00000482996 PDXPQ96GD0 296 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms