RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 TMC8Q8IU68 726 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 FIBCD1Q8N539 461 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 MDGA1Q8NFP4 955 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 TRIB3Q96RU7 358 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 BPIFA1Q9NP55 256 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 CFAP97Q9P2B7 532 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 XPR1Q9UBH6 696 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 TBC1D30Q9Y2I9 924 aa14.49□□□□□ -0.09
CHD3-211ENST00000481999 ANKRD12Q6UB98 2062 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 TMEM114B3SHH9 223 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 INSIG1O15503 277 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 SMAD6O43541 496 aaKnown RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 GOT2P00505 430 aaKnown RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 SLC25A3Q00325 362 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 ZNF697Q5TEC3 545 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 AAGABQ6PD74 315 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CILP2Q8IUL8 1156 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 LPCAT1Q8NF37 534 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 ANKRD49Q8WVL7 239 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 FATE1Q969F0 183 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 SCYL1Q96KG9 808 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 FEM1AQ9BSK4 669 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 ACE2Q9BYF1 805 aaPredicted RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 IL23AQ9NPF7 189 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 TLK1Q9UKI8 766 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 HCFC2Q9Y5Z7 792 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 ILVBLA1L0T0 632 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 GOLGA8CPA6NN73 597 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 H2AFYO75367 372 aaKnown RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 HSPA4LO95757 839 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CR2P20023 1033 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 IRS1P35568 1242 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CD151P48509 253 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CDKN2DP55273 166 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 RAB10P61026 200 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 SEMG2Q02383 582 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CSHL1Q14406 222 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CFAP157Q5JU67 520 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 ZNF781Q8N8C0 355 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 DDI1Q8WTU0 396 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 TMA16Q96EY4 203 aaKnown RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 RPL10LQ96L21 214 aaKnown RBP14.48□□□□□ -0.09
CHD3-211ENST00000481999 LRRC3Q9BY71 257 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 MAN1C1Q9NR34 630 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 SEPT3Q9UH03 358 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 SCOCQ9UIL1 159 aa14.48□□□□□ -0.09
CHD3-211ENST00000481999 CCDC162PA2VCL2 907 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 CCNT2O60583 730 aaKnown RBP14.47□□□□□ -0.09
CHD3-211ENST00000481999 LRG1P02750 347 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 STMN1P16949 149 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 PAMP19021 973 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 PLK1P53350 603 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 CDH18Q13634 790 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 TMEM207Q6UWW9 146 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 ADGRG6Q86SQ4 1221 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 POU5F2Q8N7G0 328 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 EFHBQ8N7U6 833 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 GPR78Q96P69 363 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 C17orf80Q9BSJ5 609 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 SLC46A2Q9BY10 475 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 MRM3Q9HC36 420 aaKnown RBP14.47□□□□□ -0.09
CHD3-211ENST00000481999 HSFX1Q9UBD0 423 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 VPS51Q9UID3 782 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 MID2Q9UJV3 735 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 TRIOO75962 3097 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 NOTCH4Q99466 2003 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 ZMPSTE24O75844 475 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 NCF2P19878 526 aaPredicted RBP14.47□□□□□ -0.09
CHD3-211ENST00000481999 KCNA5P22460 613 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 HADHAP40939 763 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 TNK2Q07912 1038 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 TRAF2Q12933 501 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 GSTA3Q16772 222 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 KBTBD2Q8IY47 623 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 KREMEN2Q8NCW0 462 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 PTCD2Q8WV60 388 aaKnown RBP14.47□□□□□ -0.09
CHD3-211ENST00000481999 HEXDCQ8WVB3 486 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 UCMAQ8WVF2 138 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 TDRD1Q9BXT4 1180 aaKnown RBP14.47□□□□□ -0.09
CHD3-211ENST00000481999 CDH19Q9H159 772 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 SCUBE2Q9NQ36 999 aa14.47□□□□□ -0.09
CHD3-211ENST00000481999 OLFM2O95897 454 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 FGBP02675 491 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 APOA4P06727 396 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 CD1EP15812 388 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 PRDX6P30041 224 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 PPM1AP35813 382 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 NTHL1P78549 312 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 METTL21CQ5VZV1 264 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 LILRA6Q6PI73 481 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 EPGNQ6UW88 154 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 Q6ZNB5 142 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 MFN1Q8IWA4 741 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 CCDC117Q8IWD4 279 aaPredicted RBP14.46□□□□□ -0.09
CHD3-211ENST00000481999 OR4K2Q8NGD2 314 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 ACTRT2Q8TDY3 377 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 FEM1CQ96JP0 617 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 CEP295NLQ96MC4 621 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 TTC1Q99614 292 aa14.46□□□□□ -0.09
CHD3-211ENST00000481999 GATA5Q9BWX5 397 aaPredicted RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms