RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PHTF1Q9UMS5 762 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 NENFQ9UMX5 172 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 MGAQ8IWI9 3026 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 UNC13CQ8NB66 2214 aa18.58■□□□□ 0.56
CLK1-211ENST00000481641 A0A1W2PQM1 296 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 PGLSO95336 258 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 RPLP0P05388 317 aaKnown RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 PDHA1P08559 390 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 HOXC4P09017 264 aaPredicted RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 RBMS1P29558 406 aaKnown RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 ITKQ08881 620 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 DPYSL3Q14195 570 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 NCBP2-AS2Q69YL0 99 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 RFLNAQ6ZTI6 216 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 GPR156Q8NFN8 814 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 FAM71BQ8TC56 605 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 PTCD2Q8WV60 388 aaKnown RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 KCNE4Q8WWG9 221 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 SPOCK2Q92563 424 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 GFM1Q96RP9 751 aaKnown RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 UBL7Q96S82 380 aaPredicted RBP18.57■□□□□ 0.56
CLK1-211ENST00000481641 PACSIN1Q9BY11 444 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 FOXP3Q9BZS1 431 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 CPNE5Q9HCH3 593 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 THSD1Q9NS62 852 aa18.57■□□□□ 0.56
CLK1-211ENST00000481641 PRSS38A1L453 326 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GOLGA6CA6NDK9 693 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GOLGA6BA6NDN3 693 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 EIF4E1BA6NMX2 242 aaKnown RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 B4DGG1 531 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 AGRPO00253 132 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 TNFRSF10CO14798 259 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 KLK10O43240 276 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 NOBOXO60393 691 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 FUCA1P04066 466 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GOLGA6DP0CG33 693 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 CYP2A6P11509 494 aaPredicted RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 KELP23276 732 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 TAS2R40P59535 323 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 IHHQ14623 411 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 HADHQ16836 314 aaKnown RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 ARMC12Q5T9G4 340 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 OGFOD3Q6PK18 319 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 Q6ZVL8 140 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GPR155Q7Z3F1 870 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 HEATR4Q86WZ0 1026 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 CBARPQ8N350 705 aaPredicted RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 TEX26Q8N6G2 289 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 WDR36Q8NI36 951 aaKnown RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 WDR48Q8TAF3 677 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 PIH1D2Q8WWB5 315 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GRAMD1AQ96CP6 724 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 DTD2Q96FN9 168 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 SEMA3CQ99985 751 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 XPO4Q9C0E2 1151 aaKnown RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 EPB41L5Q9HCM4 733 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 GOLGA6AQ9NYA3 693 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 CTTNBP2NLQ9P2B4 639 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 RCOR3Q9P2K3 495 aaPredicted RBP18.56■□□□□ 0.56
CLK1-211ENST00000481641 CD84Q9UIB8 345 aa18.56■□□□□ 0.56
CLK1-211ENST00000481641 CCDC187A0A096LP49 1063 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 A0A1W2PQ67 120 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 TNFSF15O95150 251 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 CEACAM5P06731 702 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 MYCLP1P12525 358 aaPredicted RBP18.55■□□□□ 0.56
CLK1-211ENST00000481641 GARSP41250 739 aaKnown RBP18.55■□□□□ 0.56
CLK1-211ENST00000481641 ANKRD20A8PQ5CZ79 823 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 FAM182AQ5T1J6 154 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 IGF2-ASQ6U949 168 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 KCTD6Q8NC69 237 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 IQCDQ96DY2 449 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 SCRN2Q96FV2 425 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 TEX101Q9BY14 249 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 LRRN3Q9H3W5 708 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 DPEP2Q9H4A9 486 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 CARS2Q9HA77 564 aaKnown RBP18.55■□□□□ 0.56
CLK1-211ENST00000481641 ATXN7L1Q9ULK2 861 aaPredicted RBP18.55■□□□□ 0.56
CLK1-211ENST00000481641 PCDHGA8Q9Y5G5 932 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 RNF215Q9Y6U7 377 aa18.55■□□□□ 0.56
CLK1-211ENST00000481641 CDRT15L2A8MXV6 281 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 D6RAR5 112 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 PROSCO94903 275 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 HGFP14210 728 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 POLD2P49005 469 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 DSC2Q02487 901 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 GALNT2Q10471 571 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 ARHGEF7Q14155 803 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 PAFAH1B3Q15102 231 aaKnown RBP18.54■□□□□ 0.56
CLK1-211ENST00000481641 ZSCAN23Q3MJ62 389 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 RALGPS1Q5JS13 557 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 CERCAMQ5T4B2 595 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 ARHGAP40Q5TG30 622 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 SPECC1LQ69YQ0 1117 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 RAET1GQ6H3X3 334 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 NRROSQ86YC3 692 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 CCNJLQ8IV13 435 aa18.54■□□□□ 0.56
CLK1-211ENST00000481641 MCCC1Q96RQ3 725 aaPredicted RBP18.54■□□□□ 0.56
CLK1-211ENST00000481641 PHPT1Q9NRX4 125 aaPredicted RBP18.54■□□□□ 0.56
CLK1-211ENST00000481641 SPATS2LQ9NUQ6 558 aaKnown RBP18.54■□□□□ 0.56
CLK1-211ENST00000481641 TTLL3Q9Y4R7 772 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms