RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 LAMB3Q13751 1172 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 ELF2Q15723 593 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 MAP7D1Q3KQU3 841 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 PCID2Q5JVF3 399 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3GQ6DHY5 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3CQ6IPX1 549 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 WDR93Q6P2C0 686 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 CASC4Q6P4E1 433 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TMC3Q7Z5M5 1100 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 GSPT2Q8IYD1 628 aaKnown RBP16.2■□□□□ 0.18
VHL-203ENST00000477538 TBC1D3Q8IZP1 549 aaPredicted RBP16.2■□□□□ 0.18
VHL-203ENST00000477538 AGGF1Q8N302 714 aaeCLIP16.2■□□□□ 0.18
VHL-203ENST00000477538 LRRC39Q96DD0 335 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 TOE1Q96GM8 510 aaKnown RBP16.2■□□□□ 0.18
VHL-203ENST00000477538 PHACTR1Q9C0D0 580 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 SAYSD1Q9NPB0 183 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 WSB2Q9NYS7 404 aaPredicted RBP16.2■□□□□ 0.18
VHL-203ENST00000477538 FBXO4Q9UKT5 387 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 ARL5AQ9Y689 179 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 MAD1L1Q9Y6D9 718 aa16.2■□□□□ 0.18
VHL-203ENST00000477538 PI4KAP42356 2102 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 FAM47DPA6NHR8 397 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 C2orf81A6NN90 581 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 PSMD11O00231 422 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 BUD23O43709 281 aaKnown RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 MMP20O60882 483 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 RNGTTO60942 597 aaKnown RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 C1SP09871 688 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 MYBL2P10244 700 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 LPOP22079 712 aaPredicted RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 STC1P52823 247 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 PDE1BQ01064 536 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 CBLBQ13191 982 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 USP39Q53GS9 565 aaKnown RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 HP1BP3Q5SSJ5 553 aaPredicted RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 ARMC3Q5W041 872 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 KIAA1161Q6NSJ0 714 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 CCNI2Q6ZMN8 369 aaPredicted RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 CEP128Q6ZU80 1094 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 WDR5BQ86VZ2 330 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 FAM160A2Q8N612 972 aaPredicted RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 FRMD1Q8N878 549 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 MYRIPQ8NFW9 859 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 OR2T34Q8NGX1 318 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 PTCD2Q8WV60 388 aaKnown RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 EID2BQ96D98 161 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 STAMBPL1Q96FJ0 436 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 SPACA7Q96KW9 195 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 PARD6BQ9BYG5 372 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 TSPYL1Q9H0U9 437 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 MRM3Q9HC36 420 aaKnown RBP16.19■□□□□ 0.18
VHL-203ENST00000477538 CHRAC1Q9NRG0 131 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 SOX13Q9UN79 622 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 CHMP2BQ9UQN3 213 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 INVSQ9Y283 1065 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 KCTD3Q9Y597 815 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 TEX264Q9Y6I9 313 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 CUL9Q8IWT3 2517 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 SDK1Q7Z5N4 2213 aa16.19■□□□□ 0.18
VHL-203ENST00000477538 CCDC78A2IDD5 438 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 MROH6A6NGR9 719 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 TUBBP07437 444 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 C6P13671 934 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 HMGCLP35914 325 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 ELK3P41970 407 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 ZNF140P52738 457 aaPredicted RBP16.18■□□□□ 0.18
VHL-203ENST00000477538 PPP2CBP62714 309 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 PPP2CAP67775 309 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 PTSQ03393 145 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 FASTKD3Q14CZ7 662 aaKnown RBP16.18■□□□□ 0.18
VHL-203ENST00000477538 ACOX1Q15067 660 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 TSTD2Q5T7W7 516 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 NEK5Q6P3R8 708 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 NLRP9Q7RTR0 991 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 HSD11B1LQ7Z5J1 315 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 ANKMY2Q8IV38 441 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 ZBED8Q8IZ13 594 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 OR4K2Q8NGD2 314 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 STYXQ8WUJ0 223 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 EBNA1BP2Q99848 306 aaKnown RBP16.18■□□□□ 0.18
VHL-203ENST00000477538 WDR83Q9BRX9 315 aaKnown RBP16.18■□□□□ 0.18
VHL-203ENST00000477538 KIFC1Q9BW19 673 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 GPR174Q9BXC1 333 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 PKD2L2Q9NZM6 624 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 IL17CQ9P0M4 197 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 ZFR2Q9UPR6 939 aaKnown RBP16.18■□□□□ 0.18
VHL-203ENST00000477538 COQ6Q9Y2Z9 468 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 PKP3Q9Y446 797 aa16.18■□□□□ 0.18
VHL-203ENST00000477538 FAM237BA0A1B0GVD1 139 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 A0A1W2PQU0 124 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 MAGEB16A2A368 324 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 IGLON5A6NGN9 336 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 STX7O15400 261 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 CTIFO43310 598 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 LZTS3O60299 673 aaPredicted RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 NDUFS2O75306 463 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 TM7SF2O76062 418 aa16.17■□□□□ 0.18
VHL-203ENST00000477538 RPS21P63220 83 aaKnown RBP16.17■□□□□ 0.18
VHL-203ENST00000477538 PTPRCAPQ14761 206 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms