RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SHROOM3Q8TF72 1996 aa10.23□□□□□ -0.77
CCM2-208ENST00000476594 A0A0J9YYE9 177 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 TTC24A2A3L6 582 aaPredicted RBP10.22□□□□□ -0.77
CCM2-208ENST00000476594 CAPN8A6NHC0 703 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 A8MX80 341 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 ZW10O43264 779 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 JCHAINP01591 159 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 TRBC1P01850 177 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 HLA-DQB2P05538 268 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 MYCLP1P12525 358 aaPredicted RBP10.22□□□□□ -0.77
CCM2-208ENST00000476594 TRIM23P36406 574 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 GPR1P46091 355 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 COPS2P61201 443 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 DYNLT1P63172 113 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 SEMG2Q02383 582 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 DSC2Q02487 901 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 SLC14A2Q15849 920 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 PNCKQ6P2M8 343 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 KIAA1328Q86T90 577 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 NT5DC3Q86UY8 548 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 CPNE8Q86YQ8 564 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 KATNAL2Q8IYT4 538 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 RCOR2Q8IZ40 523 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 SYCE1Q8N0S2 351 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 RBFAQ8N0V3 343 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 LPCAT1Q8NF37 534 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 IFI44Q8TCB0 444 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 KIAA1524Q8TCG1 905 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 MAPK15Q8TD08 544 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 TFB1MQ8WVM0 346 aaKnown RBP10.22□□□□□ -0.77
CCM2-208ENST00000476594 LRRC45Q96CN5 670 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 GRAMD1AQ96CP6 724 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 COQ10AQ96MF6 247 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 VAT1Q99536 393 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 LGMNQ99538 433 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 LRRC61Q9BV99 259 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 TMEM121BQ9BXQ6 578 aaPredicted RBP10.22□□□□□ -0.77
CCM2-208ENST00000476594 RAD18Q9NS91 495 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 PKD2L2Q9NZM6 624 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 SEPT10Q9P0V9 454 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 DKK4Q9UBT3 224 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
CCM2-208ENST00000476594 GOLGA4Q13439 2230 aaKnown RBP10.22□□□□□ -0.77
CCM2-208ENST00000476594 TDRD6O60522 2096 aaKnown RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 CACNA1GO43497 2377 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 IGF2RP11717 2491 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CCDC66A2RUB6 948 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CPED1A4D0V7 1026 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 EME2A4GXA9 379 aaPredicted RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 RGSL1A5PLK6 1076 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 NPIPB15A6NHN6 443 aaPredicted RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 BTNL10A8MVZ5 291 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 HACD1B0YJ81 288 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 KCNK1O00180 336 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 NRDCO43847 1150 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 FZD6O60353 706 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CST8O60676 142 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 CTPS1P17812 591 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CTNNA2P26232 953 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CDC25BP30305 580 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CD86P42081 329 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 DPTQ07507 201 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 KIF5AQ12840 1032 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 ILF3Q12906 894 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCM2-208ENST00000476594 BIRC2Q13490 618 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 C1orf61Q13536 156 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 PPP2R5EQ16537 467 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 ALG11Q2TAA5 492 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 KAZNQ674X7 775 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 LRRC66Q68CR7 880 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 MFSD7Q6UXD7 560 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 SPOCD1Q6ZMY3 1216 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 ZNF765Q7L2R6 523 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 TAF8Q7Z7C8 310 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 NLRP8Q86W28 1048 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 NRSN1Q8IZ57 195 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCM2-208ENST00000476594 ARL10Q8N8L6 244 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 EXD1Q8NHP7 514 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 PIH1D2Q8WWB5 315 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 TSACCQ96A04 125 aaPredicted RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 HAUS1Q96CS2 278 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 AP2M1Q96CW1 435 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 OLFM3Q96PB7 478 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 LYSMD1Q96S90 227 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 RBM15Q96T37 977 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCM2-208ENST00000476594 BAG1Q99933 345 aaPredicted RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 MLPHQ9BV36 600 aaPredicted RBP10.21□□□□□ -0.77
CCM2-208ENST00000476594 BOCQ9BWV1 1114 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 GSDMCQ9BYG8 508 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 NRSN2Q9GZP1 204 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CDH19Q9H159 772 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 SLC25A51Q9H1U9 297 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 GPR34Q9UPC5 381 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 CHKBQ9Y259 395 aa10.21□□□□□ -0.77
CCM2-208ENST00000476594 KNTC1P50748 2209 aa10.21□□□□□ -0.78
CCM2-208ENST00000476594 ARID1BQ8NFD5 2236 aaPredicted RBP10.21□□□□□ -0.78
CCM2-208ENST00000476594 C1orf232A0A0U1RR37 186 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms