RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 APOLD1Q96LR9 279 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 FZD3Q9NPG1 666 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 DECR2Q9NUI1 292 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 SEC63Q9UGP8 760 aaKnown RBP6.08□□□□□ -1.44
VPS50-212ENST00000476413 MAU2Q9Y6X3 613 aa6.08□□□□□ -1.44
VPS50-212ENST00000476413 C1orf226A1L170 272 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 CTDSP2O14595 271 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 TPPPO94811 219 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 SRPRAP08240 638 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 PON1P27169 355 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 PIGAP37287 484 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 PIK3CAP42336 1068 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 NRIP1P48552 1158 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 ALDH7A1P49419 539 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 MRPL12P52815 198 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 MFAP4P55083 255 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 INHBEP58166 350 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 MYBPC2Q14324 1141 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 WASHC2DQ5SRD0 308 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 DCAF12L2Q5VW00 463 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 RPUSD3Q6P087 351 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 DPPA4Q7L190 304 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 CTU1Q7Z7A3 348 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 RNF168Q8IYW5 571 aaPredicted RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 MMP21Q8N119 569 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 URB1-AS1Q96HZ7 61 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 GFM1Q96RP9 751 aaKnown RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 ISCUQ9H1K1 167 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 SLC28A3Q9HAS3 691 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 NRIP3Q9NQ35 241 aa6.07□□□□□ -1.44
VPS50-212ENST00000476413 NFKBIL1Q9UBC1 381 aaPredicted RBP6.07□□□□□ -1.44
VPS50-212ENST00000476413 LY6G6EA0A0G2JKS1 128 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 VCYO14598 125 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 TCERG1O14776 1098 aaKnown RBP6.06□□□□□ -1.44
VPS50-212ENST00000476413 HS6ST1O60243 411 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 SOX30O94993 753 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 NDUFB4O95168 129 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 FGBP02675 491 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 TAS2R40P59535 323 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ACSM2AQ08AH3 577 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ST3GAL1Q11201 340 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 NAB2Q15742 525 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 EZH2Q15910 746 aaKnown RBP6.06□□□□□ -1.44
VPS50-212ENST00000476413 ZSCAN23Q3MJ62 389 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 DCAF6Q58WW2 860 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 GARNL3Q5VVW2 1013 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 TMEM198Q66K66 360 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ACSM2BQ68CK6 577 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 SLC30A6Q6NXT4 461 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ZNF367Q7RTV3 350 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 TEX11Q8IYF3 940 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 SCCPDHQ8NBX0 429 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 AGBL3Q8NEM8 1001 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 JAKMIP2Q96AA8 810 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 OTULINQ96BN8 352 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ZNF570Q96NI8 536 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 FIZ1Q96SL8 496 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ACOX2Q99424 681 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 NCAPGQ9BPX3 1015 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 IFIH1Q9BYX4 1025 aaKnown RBP6.06□□□□□ -1.44
VPS50-212ENST00000476413 SPRTNQ9H040 489 aaPredicted RBP6.06□□□□□ -1.44
VPS50-212ENST00000476413 WDR26Q9H7D7 661 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 LTB4R2Q9NPC1 389 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 HINT3Q9NQE9 182 aaKnown RBP6.06□□□□□ -1.44
VPS50-212ENST00000476413 TMEM51Q9NW97 253 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ERVK-11Q9UQG0 969 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 HS3ST3B1Q9Y662 390 aa6.06□□□□□ -1.44
VPS50-212ENST00000476413 ZNF804BA4D1E1 1349 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 A8MV72 311 aaPredicted RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 WNT9BO14905 357 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 JRKO75564 520 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 LCATP04180 440 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 ARSBP15848 533 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 TMEM11P17152 192 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 MAOAP21397 527 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 ZP1P60852 638 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 KLF9Q13886 244 aaPredicted RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 SRSF7Q16629 238 aaKnown RBP eCLIP6.05□□□□□ -1.44
VPS50-212ENST00000476413 BMP2KLQ5H9B9 411 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 ADGRA1Q86SQ6 560 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 KBTBD6Q86V97 674 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 NEXN-AS1Q8NBZ9 246 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 C7orf57Q8NEG2 295 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 SAT2Q96F10 170 aaPredicted RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 VCPIP1Q96JH7 1222 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 TEX12Q9BXU0 123 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 GPR108Q9NPR9 543 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 GIMAP4Q9NUV9 329 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 PAG1Q9NWQ8 432 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 MTMR10Q9NXD2 777 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 CWC15Q9P013 229 aaKnown RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 MRPL15Q9P015 296 aaKnown RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 PTGFRNQ9P2B2 879 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 MORF4L1Q9UBU8 362 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 PTRH2Q9Y3E5 179 aaKnown RBP6.05□□□□□ -1.44
VPS50-212ENST00000476413 CMAHPQ9Y471 501 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 CLIC4Q9Y696 253 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 FAM169AQ9Y6X4 670 aa6.05□□□□□ -1.44
VPS50-212ENST00000476413 BECN2A8MW95 431 aa6.04□□□□□ -1.44
VPS50-212ENST00000476413 TIMM23O14925 209 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms