RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 CNNM1Q9NRU3 951 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 DNAJC17Q9NVM6 304 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 TMOD3Q9NYL9 352 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MTRRQ9UBK8 725 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PACSIN3Q9UKS6 424 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 INTS6Q9UL03 887 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 SCAF8Q9UPN6 1271 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 LOC102724428A0A0B4J2F2 783 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NOTOA8MTQ0 251 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MINDY4BA8MYZ0 360 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PI4K2BG5E9Z4 385 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 I3L4J1 428 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TPP1O14773 563 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZW10O43264 779 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ADAM11O75078 769 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 EEDO75530 441 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 WBP4O75554 376 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 PGK2P07205 417 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ITGB5P18084 799 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PIGAP37287 484 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PTGER2P43116 358 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NAMPTP43490 491 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ALDH3A2P51648 485 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GAS1P54826 345 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SIK1P57059 783 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GNG2P59768 71 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 C1QTNF8P60827 252 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GNA12Q03113 381 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 EMX1Q04741 257 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 POU5F1BQ06416 359 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SNTA1Q13424 505 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ASAH1Q13510 395 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CUL2Q13617 745 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PTPN20Q4JDL3 420 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ALFQ53S48 1182 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TMTC4Q5T4D3 741 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PIK3R6Q5UE93 754 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 FAHD1Q6P587 224 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 DARS2Q6PI48 645 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 AMIGO3Q86WK7 504 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PGBD5Q8N414 524 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SLC44A3Q8N4M1 653 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 IL17RCQ8NAC3 791 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KCT2Q8NC54 265 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF485Q8NCK3 441 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NDNFQ8TB73 568 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LPGAT1Q92604 370 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LRCH3Q96II8 777 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 WNK4Q96J92 1243 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MSLNLQ96KJ4 702 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 FCRL1Q96LA6 429 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SAMD11Q96NU1 681 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 RNF157Q96PX1 679 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF670Q9BS34 389 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NUF2Q9BZD4 464 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CEP44Q9C0F1 390 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ACTL8Q9H568 366 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SYNDIG1Q9H7V2 258 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ERVMER34-1Q9H9K5 563 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GBA2Q9HCG7 927 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 MRPL47Q9HD33 250 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF275Q9NSD4 429 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 ANKEF1Q9NU02 776 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 SLCO1C1Q9NYB5 712 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 PPARGC1AQ9UBK2 798 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 ZMAT5Q9UDW3 170 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 BCAP29Q9UHQ4 241 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF451Q9Y4E5 1061 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GPR45Q9Y5Y3 372 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 STON1Q9Y6Q2 735 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KAT6AQ92794 2004 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 VWA8A3KMH1 1905 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CCDC78A2IDD5 438 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 HMX3A6NHT5 357 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 A8MVJ9 347 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ARNTLO00327 626 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KCNJ13O60928 360 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 CALCAP01258 141 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MT-ND3P03897 115 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 MPOP05164 745 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ADRA1AP35348 466 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LIG4P49917 911 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 NRLP54845 237 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 FCGRTP55899 365 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 YWHAGP61981 247 aaKnown RBP eCLIP4.11□□□□□ -1.75
USP16-205ENST00000474835 ACVR1Q04771 509 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 RAD51Q06609 339 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 EFR3AQ14156 821 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 LLGL1Q15334 1064 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TAF5Q15542 800 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 UGCGQ16739 394 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.11□□□□□ -1.75
USP16-205ENST00000474835 SETMARQ53H47 684 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 FSCBQ5H9T9 825 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 N4BP2L1Q5TBK1 243 aaPredicted RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 ZBTB37Q5TC79 503 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 KANK2Q63ZY3 851 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 TWF2Q6IBS0 349 aaKnown RBP4.11□□□□□ -1.75
USP16-205ENST00000474835 IYDQ6PHW0 289 aa4.11□□□□□ -1.75
USP16-205ENST00000474835 GPRIN3Q6ZVF9 776 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms