RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CFAP58Q5T655 872 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 CCDC181Q5TID7 509 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 ERAP2Q6P179 960 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 CRTC1Q6UUV9 634 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 KDELC2Q7Z4H8 507 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 HSD11B1LQ7Z5J1 315 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 RAB44Q7Z6P3 723 aaPredicted RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 MFSD2AQ8NA29 543 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 PLA2G15Q8NCC3 412 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 CXorf40AQ8TE69 158 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 ASB12Q8WXK4 309 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 EID2BQ96D98 161 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 SCRN2Q96FV2 425 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 MRGPRX2Q96LB1 330 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 COQ10AQ96MF6 247 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 MLPHQ9BV36 600 aaPredicted RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 CARD9Q9H257 536 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 PCDH9Q9HC56 1237 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 DNAAF2Q9NVR5 837 aaKnown RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 TPX2Q9ULW0 747 aaKnown RBP13.15□□□□□ -0.3
TPM3-216ENST00000473036 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
TPM3-216ENST00000473036 LRP4O75096 1905 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 K7ESM1 405 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 KCNN4O15554 427 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 CAPNS1P04632 268 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 ATP1A1P05023 1023 aaKnown RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 C1SP09871 688 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 ATXN1LP0C7T5 689 aaKnown RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 CD59P13987 128 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 XPAP23025 273 aaPredicted RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 VIPR1P32241 457 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 NUDT1P36639 197 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 PFN3P60673 137 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 POLR2LP62875 67 aaKnown RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 PTSQ03393 145 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 AGERQ15109 404 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 IRF4Q15306 451 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 ANKRD20A2Q5SQ80 823 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 ANKRD20A1Q5TYW2 823 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 ANKRD20A3Q5VUR7 823 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 KCTD16Q68DU8 428 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 DARS2Q6PI48 645 aaKnown RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 PID1Q7Z2X4 250 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 C17orf53Q8N3J3 647 aaPredicted RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 LPCAT1Q8NF37 534 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 KIF18AQ8NI77 898 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 CCDC110Q8TBZ0 833 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 C1orf54Q8WWF1 131 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 MS4A14Q96JA4 679 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 FCRL5Q96RD9 977 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 NAPGQ99747 312 aaPredicted RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 GAREM1Q9H706 876 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 SMARCAL1Q9NZC9 954 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
TPM3-216ENST00000473036 RNF14Q9UBS8 474 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
TPM3-216ENST00000473036 MYLKQ15746 1914 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 IGSF10Q6WRI0 2623 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 GCN1Q92616 2671 aaKnown RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 LOC285095A0A1B0GVY8 99 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 A0A1W2PQ67 120 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 CFAP69A5D8W1 941 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 ANKRD66B4E2M5 251 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 CES2O00748 559 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 LIASO43766 372 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 PMPCBO75439 489 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 RECQL5O94762 991 aaPredicted RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 METTL18O95568 372 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 THEGLP0DJG4 465 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 TCP1P17987 556 aaKnown RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 AKT2P31751 481 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 ETV3P41162 512 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 CHRNA4P43681 627 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 IL9RQ01113 521 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 SGCGQ13326 291 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 STAT4Q14765 748 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 PCSK7Q16549 785 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 LRRC66Q68CR7 880 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 KYAT3Q6YP21 454 aaKnown RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 Q6ZSR6 202 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 TECPR1Q7Z6L1 1165 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 IQCHQ86VS3 1027 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 CDKL3Q8IVW4 592 aaPredicted RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 KLHDC8BQ8IXV7 354 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 FAM71DQ8N9W8 422 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 GLIS1Q8NBF1 620 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 PBKQ96KB5 322 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 NAP1L3Q99457 506 aaPredicted RBP13.13□□□□□ -0.31
TPM3-216ENST00000473036 TMEM121Q9BTD3 319 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 ZDHHC5Q9C0B5 715 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 GBA3Q9H227 469 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 KLF15Q9UIH9 416 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 SPO11Q9Y5K1 396 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 LOC400499M0QZD8 3231 aa13.13□□□□□ -0.31
TPM3-216ENST00000473036 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
TPM3-216ENST00000473036 CAPN8A6NHC0 703 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms