RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 IL17RCQ8NAC3 791 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 C11orf65Q8NCR3 313 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 BEST2Q8NFU1 509 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 LRRC8CQ8TDW0 803 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 PPM1EQ8WY54 764 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 RND1Q92730 232 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 USP13Q92995 863 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TRIM63Q969Q1 353 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZSCAN31Q96LW9 406 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TTC14Q96N46 770 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF570Q96NI8 536 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 LBHD1Q9BQE6 289 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 MAGEE1Q9HCI5 957 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 BPIFA1Q9NP55 256 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 MKKSQ9NPJ1 570 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 RIC8AQ9NPQ8 531 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 KLHL1Q9NR64 748 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZFP57Q9NU63 452 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 BEX4Q9NWD9 120 aaPredicted RBP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 MCM9Q9NXL9 1143 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TAAR2Q9P1P5 351 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 RCOR1Q9UKL0 485 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.43□□□□□ -2.18
UBXN4-207ENST00000471246 FAM96BQ9Y3D0 163 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF711Q9Y462 761 aa1.43□□□□□ -2.18
UBXN4-207ENST00000471246 TMEM202A6NGA9 273 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GAGE10A6NGK3 116 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TEX22C9J3V5 150 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 AKR1B15C9JRZ8 316 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 ZG16O60844 167 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GUCY1B2O75343 617 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PEX14O75381 377 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PAK4O96013 591 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 CGAP01215 116 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TFP02787 698 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 ATP1A1P05023 1023 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 CFC1BP0CG36 223 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 CFC1P0CG37 223 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 MAOAP21397 527 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 S1PR1P21453 382 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 SHMT1P34896 483 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GGT5P36269 586 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 USP8P40818 1118 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 FMO5P49326 533 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 CDH15P55291 814 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPH2P55795 449 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PITX1P78337 314 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PPFIA1Q13136 1202 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 DMP1Q13316 513 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PPP2R5BQ15173 497 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TAF12Q16514 161 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 HIST2H2ACQ16777 129 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 SYT16Q17RD7 645 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 KRTAP13-3Q3SY46 172 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 SGO1Q5FBB7 561 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 STXBP5Q5T5C0 1151 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 IRAK1BP1Q5VVH5 260 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TXNDC8Q6A555 127 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 ADAM5Q6NVV9 412 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 KCTD18Q6PI47 426 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 FBXO46Q6PJ61 603 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 C19orf48Q6RUI8 117 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GFRALQ6UXV0 394 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 QSOX2Q6ZRP7 698 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 LRRC8DQ7L1W4 858 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TAOK1Q7L7X3 1001 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 LINGO2Q7L985 606 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 RRM2BQ7LG56 351 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 DSG4Q86SJ6 1040 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TMEM219Q86XT9 240 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 C1orf87Q8N0U7 546 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 ZCCHC9Q8N567 271 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 OR13A1Q8NGR1 328 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 HUS1BQ8NHY5 278 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 DUSP19Q8WTR2 217 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 NOC3LQ8WTT2 800 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 SLC20A1Q8WUM9 679 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 WBP2Q969T9 261 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GCC1Q96CN9 775 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PABPC5Q96DU9 382 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PGLYRP2Q96PD5 576 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 MPHOSPH8Q99549 860 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 HERPUD2Q9BSE4 406 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 GPR63Q9BZJ6 419 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TKTL2Q9H0I9 626 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 KCNN2Q9H2S1 579 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PPP1R3EQ9H7J1 279 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PPCSQ9HAB8 311 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PLEKHA5Q9HAU0 1116 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PCDH9Q9HC56 1237 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF334Q9HCZ1 680 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 TMEM160Q9NX00 188 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 HCN3Q9P1Z3 774 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 CNOT7Q9UIV1 285 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 FBXO9Q9UK97 447 aaPredicted RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 RALYQ9UKM9 306 aaKnown RBP1.42□□□□□ -2.18
UBXN4-207ENST00000471246 AMDHD2Q9Y303 409 aa1.42□□□□□ -2.18
UBXN4-207ENST00000471246 PDS5AQ29RF7 1337 aaKnown RBP1.41□□□□□ -2.18
UBXN4-207ENST00000471246 A0A1W2PS18 150 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms