RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 ZBTB16Q05516 673 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CCINQ13939 588 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CST6Q15828 149 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 HSP90AA5PQ58FG0 334 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 LRRC66Q68CR7 880 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 ZNF470Q6ECI4 717 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 NEPROQ6NW34 567 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 TRMT10BQ6PF06 316 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 CRTC1Q6UUV9 634 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 PARS2Q7L3T8 475 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 LYSMD3Q7Z3D4 306 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 PTAR1Q7Z6K3 402 aaPredicted RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 GJD3Q8N144 294 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 SIX5Q8N196 739 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 MDGA1Q8NFP4 955 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 OR13C4Q8NGS5 318 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 OR4L1Q8NH43 312 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 EPS8L3Q8TE67 593 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 CXorf40AQ8TE69 158 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 HDAC10Q969S8 669 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 DNAJC1Q96KC8 554 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 ZNF778Q96MU6 729 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 FCRL3Q96P31 734 aaPredicted RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 MCCC1Q96RQ3 725 aaPredicted RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 LYSMD1Q96S90 227 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CPNE1Q99829 537 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 C19orf43Q9BQ61 176 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 TRIM56Q9BRZ2 755 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 HDAC8Q9BY41 377 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CDH19Q9H159 772 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 RSPH9Q9H1X1 276 aaPredicted RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 MFSD1Q9H3U5 465 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 TREX1Q9NSU2 369 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 POLR3BQ9NW08 1133 aaPredicted RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 MOCS1Q9NZB8 636 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 B4GALT6Q9UBX8 382 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 SLC2A6Q9UGQ3 507 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 TBK1Q9UHD2 729 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 VPS9D1Q9Y2B5 631 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 NFS1Q9Y697 457 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CHD5Q8TDI0 1954 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 RGSL1A5PLK6 1076 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 NPIPB15A6NHN6 443 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 C19orf67A6NJJ6 358 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 FAM170BA6NMN3 283 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 HMGB1P1B2RPK0 211 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 AURKAO14965 403 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 MID1O15344 667 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 RNASEH2AO75792 299 aaKnown RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 GOT2P00505 430 aaKnown RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 ADRB3P13945 408 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 ITGALP20701 1170 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 SPRP35270 261 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 SPAM1P38567 509 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 GP5P40197 560 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 DGKEP52429 567 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 ZNF140P52738 457 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 MSLNQ13421 630 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 EFTUD2Q15029 972 aaKnown RBP eCLIP9.76□□□□□ -0.85
CCM2-204ENST00000470837 TMED2Q15363 201 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 ZRANB3Q5FWF4 1079 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 LRRC73Q5JTD7 316 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 GRTP1Q5TC63 336 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 KIAA1324Q6UXG2 1013 aaKnown RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 KIAA0408Q6ZU52 694 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 MARK2Q7KZI7 788 aaKnown RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 DPPA4Q7L190 304 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 TAS2R42Q7RTR8 314 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 STRA8Q7Z7C7 330 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 ZSWIM9Q86XI8 627 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 CACUL1Q86Y37 369 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 TDRPQ86YL5 185 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 TMPRSS6Q8IU80 811 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 PGBD3Q8N328 593 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 TTC30BQ8N4P2 665 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 HDDC3Q8N4P3 179 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 OR13J1Q8NGT2 312 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 SLC44A1Q8WWI5 657 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 EZH1Q92800 747 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 ZBTB9Q96C00 473 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 MTBPQ96DY7 904 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 SIPA1Q96FS4 1042 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 PGM2Q96G03 612 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 CDKN2AIPNLQ96HQ2 116 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 TBATAQ96M53 351 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 CCDC68Q9H2F9 335 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 LMAN1LQ9HAT1 526 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 BPIFA1Q9NP55 256 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 LTB4R2Q9NPC1 389 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 CATSPERZQ9NTU4 200 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 ZNF180Q9UJW8 692 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 SARDHQ9UL12 918 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 HCN2Q9UL51 889 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 MMP17Q9ULZ9 603 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 KCTD3Q9Y597 815 aa9.76□□□□□ -0.85
CCM2-204ENST00000470837 KIF26AQ9ULI4 1882 aaPredicted RBP9.76□□□□□ -0.85
CCM2-204ENST00000470837 MYOFQ9NZM1 2061 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 GLYATL1P3A0A0U1RQE8 302 aa9.75□□□□□ -0.85
CCM2-204ENST00000470837 A0A1W2PP55 124 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms