RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ZNF776Q68DI1 518 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CPXM2Q8N436 756 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF557Q8N988 423 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF610Q8N9Z0 462 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 B3GALNT2Q8NCR0 500 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 MYRIPQ8NFW9 859 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 WDR48Q8TAF3 677 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 WFIKKN2Q8TEU8 576 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 GTF3C6Q969F1 213 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ERLEC1Q96DZ1 483 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SMARCD1Q96GM5 515 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ANKRD36BP1Q96IX9 119 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CDK5RAP3Q96JB5 506 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 FIZ1Q96SL8 496 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 REEP2Q9BRK0 252 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 MMTAG2Q9BU76 263 aaKnown RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CIPCQ9C0C6 399 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ABCG4Q9H172 646 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SLC25A18Q9H1K4 315 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 RBAKQ9NYW8 714 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 HSPBP1Q9NZL4 362 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SUN2Q9UH99 717 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CHORDC1Q9UHD1 332 aaPredicted RBP5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SIX4Q9UIU6 781 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 TUBD1Q9UJT1 453 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 ANAPC2Q9UJX6 822 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 EXOC7Q9UPT5 735 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 SPEF1Q9Y4P9 236 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 BSNQ9UPA5 3926 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 NUMA1Q14980 2115 aa5.62□□□□□ -1.51
PTCD3-207ENST00000467273 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 NBPF19A0A087WUL8 3843 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 MROH6A6NGR9 719 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PP2D1A8MPX8 630 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ACOT7O00154 380 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 LATO43561 262 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 HCRTO43612 131 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 TCEA3O75764 348 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 KRT38O76015 456 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ATP5BP06576 529 aaKnown RBP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CACNA2D1P54289 1103 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 COG7P83436 770 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PIN1Q13526 163 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ALCAMQ13740 583 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ICAM4Q14773 271 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PDCD1Q15116 288 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PCBP2Q15366 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 C2CD3Q4AC94 2353 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 TMEM119Q4V9L6 283 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CCDC92Q53HC0 331 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CATSPEREQ5SY80 951 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 NAPEPLDQ6IQ20 393 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF585AQ6P3V2 769 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 NCEH1Q6PIU2 408 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CACUL1Q86Y37 369 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 EGFL6Q8IUX8 553 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 KDM1BQ8NB78 822 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SCAMP5Q8TAC9 235 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SPATA20Q8TB22 786 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF564Q8TBZ8 553 aaPredicted RBP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CPA5Q8WXQ8 436 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 WBP2Q969T9 261 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ERP27Q96DN0 273 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SERAC1Q96JX3 654 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 TNIP3Q96KP6 325 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 C16orf92Q96LL3 132 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 FAM213AQ9BRX8 229 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 B3GNT5Q9BYG0 378 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 ZNF518BQ9C0D4 1074 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 MTMR12Q9C0I1 747 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PABPC3Q9H361 631 aaKnown RBP5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CSNK1G1Q9HCP0 422 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PNPLA8Q9NP80 782 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 TMEM30AQ9NV96 361 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 INTS13Q9NVM9 706 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 FBXL12Q9NXK8 326 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PLK2Q9NYY3 685 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SEL1LQ9UBV2 794 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 POLG2Q9UHN1 485 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 NUDT5Q9UKK9 219 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SATB2Q9UPW6 733 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 SCML2Q9UQR0 700 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 DMTF1Q9Y222 760 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 PCDHGA7Q9Y5G6 932 aa5.61□□□□□ -1.51
PTCD3-207ENST00000467273 CRYBG3Q68DQ2 2970 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 A0A1B0GVM2 712 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 NEMP2A6NFY4 417 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 PRAMEF25A6NGN4 478 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 TRIM38O00635 465 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 TBCAO75347 108 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 STC2O76061 302 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 TNNC2P02585 160 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 DLDP09622 509 aaKnown RBP5.6□□□□□ -1.51
PTCD3-207ENST00000467273 RBP3P10745 1247 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 RRM1P23921 792 aa5.6□□□□□ -1.51
PTCD3-207ENST00000467273 SDHAP31040 664 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms