RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 BLOC1S5Q8TDH9 187 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 ART4Q93070 314 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 COQ10AQ96MF6 247 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 FOXP3Q9BZS1 431 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 DPH5Q9H2P9 285 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 C6orf106Q9H6K1 298 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 RAD18Q9NS91 495 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 ZFR2Q9UPR6 939 aaKnown RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 DMTF1Q9Y222 760 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.2■□□□□ 0.02
NPHP4-205ENST00000466897 HCN4Q9Y3Q4 1203 aa15.2■□□□□ 0.02
NPHP4-205ENST00000466897 WDFY4Q6ZS81 3184 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 A0A1W2PQU0 124 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 HEATR9A2RTY3 570 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 MROH6A6NGR9 719 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 C2orf81A6NN90 581 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 LDB2O43679 373 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 CLDN7O95471 211 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 IGHV4-34P06331 123 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PIRTP0C851 137 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 GM2AP17900 193 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 ADRA1DP25100 572 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 DCDC1P59894 354 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PPP2CBP62714 309 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PPP2CAP67775 309 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 CUL1Q13616 776 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PTPRRQ15256 657 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 SETMARQ53H47 684 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PMS2CLQ68D20 193 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 ZNF765Q7L2R6 523 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 LPCAT2Q7L5N7 544 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 NLRP9Q7RTR0 991 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 NLRP8Q86W28 1048 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 NRSN1Q8IZ57 195 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 ZCCHC9Q8N567 271 aaKnown RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 DENND6BQ8NEG7 585 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 DTX3LQ8TDB6 740 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 EID2BQ96D98 161 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 LRRC39Q96DD0 335 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 LENG8Q96PV6 779 aaPredicted RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 SMIM14Q96QK8 99 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 WRAP53Q9BUR4 548 aaKnown RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 C1QTNF7Q9BXJ2 289 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 GPR63Q9BZJ6 419 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 MRM3Q9HC36 420 aaKnown RBP15.19■□□□□ 0.02
NPHP4-205ENST00000466897 EPB41L5Q9HCM4 733 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 GDF3Q9NR23 364 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PKD2L2Q9NZM6 624 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 IL17CQ9P0M4 197 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 PLXNB3Q9ULL4 1909 aa15.19■□□□□ 0.02
NPHP4-205ENST00000466897 IGLON5A6NGN9 336 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 FAM47DPA6NHR8 397 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 E7ESA3 106 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 MAP3K13O43283 966 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 MMP20O60882 483 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 C1SP09871 688 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 LPOP22079 712 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-205ENST00000466897 SPINT3P49223 89 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 ZNF140P52738 457 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PTPN5P54829 565 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 ARL4CP56559 192 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 DPTQ07507 201 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 TCF15Q12870 199 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 POU6F1Q14863 301 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 HIF1AQ16665 826 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PLK5Q496M5 336 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 DNAJC21Q5F1R6 531 aaKnown RBP15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PCID2Q5JVF3 399 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 CERCAMQ5T4B2 595 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 SEL1L3Q68CR1 1132 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 ZDHHC24Q6UX98 284 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 HSD11B1LQ7Z5J1 315 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 TECPR1Q7Z6L1 1165 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 IFT20Q8IY31 132 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PDIK1LQ8N165 341 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PRSS33Q8NF86 280 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 DNASE2BQ8WZ79 361 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 BIRC7Q96CA5 298 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 DTD2Q96FN9 168 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PLEKHG4BQ96PX9 1271 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 SLC17A9Q9BYT1 436 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 RRAGDQ9NQL2 400 aaPredicted RBP15.18■□□□□ 0.02
NPHP4-205ENST00000466897 ZDHHC18Q9NUE0 388 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 INVSQ9Y283 1065 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 PKP3Q9Y446 797 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 TCAF1Q9Y4C2 921 aa15.18■□□□□ 0.02
NPHP4-205ENST00000466897 A0A1W2PPC4 97 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 MAGEB16A2A368 324 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 SDR42E2A6NKP2 422 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 A8MX80 341 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 GOLGA8MH3BSY2 632 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 H7C0S8 307 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 WNT9AO14904 365 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 AURKAO14965 403 aa15.17■□□□□ 0.02
NPHP4-205ENST00000466897 EIF3HO15372 352 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPHP4-205ENST00000466897 LZTS3O60299 673 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-205ENST00000466897 RECQL5O94762 991 aaPredicted RBP15.17■□□□□ 0.02
NPHP4-205ENST00000466897 RHOBTB1O94844 696 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms