RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 NEMP2A6NFY4 417 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 E7EVH7 732 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 F8W8V4 182 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 RASGRP1O95267 797 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 CD68P34810 354 aaPredicted RBP10.7□□□□□ -0.7
UBR4-208ENST00000459947 HNF1BP35680 557 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 CSNK1EP49674 416 aaKnown RBP10.7□□□□□ -0.7
UBR4-208ENST00000459947 IRF4Q15306 451 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ADAMTSL4Q6UY14 1074 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 NLRP9Q7RTR0 991 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 GSTA5Q7RTV2 222 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ZSWIM9Q86XI8 627 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 GLMNQ92990 594 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 GAREM1Q9H706 876 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 RMI1Q9H9A7 625 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ZFYVE1Q9HBF4 777 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 SPASTQ9UBP0 616 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ITM2BQ9Y287 266 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 SMAPO00193 183 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PAK4O96013 591 aaPredicted RBP10.7□□□□□ -0.7
UBR4-208ENST00000459947 PRLP01236 227 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 GRK6P43250 576 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 KIF19Q2TAC6 998 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 CRTC1Q6UUV9 634 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 FAM71DQ8N9W8 422 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 IPMKQ8NFU5 416 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PLEKHG4BQ96PX9 1271 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 KLF6Q99612 283 aaPredicted RBP10.7□□□□□ -0.7
UBR4-208ENST00000459947 RIMKLBQ9ULI2 386 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 SAR1BQ9Y6B6 198 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ABCA7Q8IZY2 2146 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 C1orf232A0A0U1RR37 186 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 C2orf81A6NN90 581 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PHF2O75151 1096 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 IGFALSP35858 605 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 HLA-BQ31612 363 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 LRRC66Q68CR7 880 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 Q6ZSR6 202 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 HERPUD2Q9BSE4 406 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 ZSCAN5AQ9BUG6 496 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 APOOQ9BUR5 198 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 FICDQ9BVA6 458 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 WDR26Q9H7D7 661 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PYCARDQ9ULZ3 195 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 PKP3Q9Y446 797 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.7□□□□□ -0.7
UBR4-208ENST00000459947 TRPM6Q9BX84 2022 aa10.7□□□□□ -0.7
UBR4-208ENST00000459947 NPIPB15A6NHN6 443 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 AP2A1O95782 977 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 ALPIP09923 528 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 PSMB4P28070 264 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 LLGL1Q15334 1064 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 SLC1A5Q15758 541 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 TECPR1Q7Z6L1 1165 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 HEXDCQ8WVB3 486 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 DUSP23Q9BVJ7 150 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 TM7SF3Q9NS93 570 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 MYCLP1P12525 358 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 EPHA8P29322 1005 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 CASQ1P31415 396 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 SEMA5AQ13591 1074 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 TAF1AQ15573 450 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 PCSK7Q16549 785 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 WSCD2Q2TBF2 565 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 AADACL2Q6P093 401 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 TRAM1L1Q8N609 369 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 PEX13Q92968 403 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 MAGOHBQ96A72 148 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 AP2M1Q96CW1 435 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 MRGPRX2Q96LB1 330 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 ZCCHC2Q9C0B9 1178 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 FAM83DQ9H4H8 585 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 SNX11Q9Y5W9 270 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 SPTY2D1-AS1A0A0U1RR47 76 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 ATP1A1P05023 1023 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 CTPS1P17812 591 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 HADHAP40939 763 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 GPR1P46091 355 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 DUSP3P51452 185 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 ETF1P62495 437 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 CKAP4Q07065 602 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 PNCKQ6P2M8 343 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 TMC3Q7Z5M5 1100 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 CCDC110Q8TBZ0 833 aa10.69□□□□□ -0.7
UBR4-208ENST00000459947 FRMD8Q9BZ67 464 aaPredicted RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 R3HDM2Q9Y2K5 976 aaKnown RBP10.69□□□□□ -0.7
UBR4-208ENST00000459947 PATE3B3GLJ2 98 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 NME1P15531 152 aaKnown RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 SPINT3P49223 89 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 ITGA9Q13797 1035 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 FGL2Q14314 439 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SIX1Q15475 284 aaPredicted RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 LVRNQ6Q4G3 990 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 PPP1R21Q6ZMI0 780 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 C1orf54Q8WWF1 131 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 SCG3Q8WXD2 468 aaKnown RBP10.68□□□□□ -0.7
UBR4-208ENST00000459947 KLK6Q92876 244 aa10.68□□□□□ -0.7
UBR4-208ENST00000459947 ULK4Q96C45 1275 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms