RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 LIN28AQ9H9Z2 209 aaKnown RBP17.72■□□□□ 0.43
PTPN6-204ENST00000456013 SFMBT1Q9UHJ3 866 aa17.72■□□□□ 0.43
PTPN6-204ENST00000456013 DNAJC15Q9Y5T4 150 aa17.72■□□□□ 0.43
PTPN6-204ENST00000456013 DHRS12A0PJE2 317 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 E9PAM4 449 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 NR5A2O00482 541 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 PEX11BO96011 259 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 MYL3P08590 195 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 SH3BP2P78314 561 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 PRAMEP78395 509 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 BNIP2Q12982 314 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 LDLRAD1Q5T700 205 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 EPHX4Q8IUS5 362 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 SLC15A3Q8IY34 581 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 CBR4Q8N4T8 237 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 FEM1CQ96JP0 617 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 SLC45A3Q96JT2 553 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 SMOC2Q9H3U7 446 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 AGPAT4Q9NRZ5 378 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 SMOXQ9NWM0 555 aa17.71■□□□□ 0.43
PTPN6-204ENST00000456013 MROH6A6NGR9 719 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.42
PTPN6-204ENST00000456013 IL10P22301 178 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 LCN8Q6JVE9 175 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 GPR141Q7Z602 305 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 TNIP2Q8NFZ5 429 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.71■□□□□ 0.42
PTPN6-204ENST00000456013 PTERQ96BW5 349 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 SGIP1Q9BQI5 828 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 FAM105AQ9NUU6 356 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 TMLHEQ9NVH6 421 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 LMCD1Q9NZU5 365 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 MPP6Q9NZW5 540 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 AURKCQ9UQB9 309 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 SLC45A1Q9Y2W3 748 aa17.71■□□□□ 0.42
PTPN6-204ENST00000456013 MRPL42Q9Y6G3 142 aaKnown RBP17.71■□□□□ 0.42
PTPN6-204ENST00000456013 NLRC5Q86WI3 1866 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 hCG_2014768A0A024R1R8 64 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 TRIM64A6NGJ6 449 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 WASH4PA8MWX3 477 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 MSI1O43347 362 aaKnown RBP17.7■□□□□ 0.42
PTPN6-204ENST00000456013 CDK14O94921 469 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 ODC1P11926 461 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 RPL9P32969 192 aaKnown RBP17.7■□□□□ 0.42
PTPN6-204ENST00000456013 CDH13P55290 713 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 NUP107P57740 925 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 ESRRGP62508 458 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 NRG1Q02297 640 aaPredicted RBP17.7■□□□□ 0.42
PTPN6-204ENST00000456013 ZBED5Q49AG3 693 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 PRAMEF19Q5SWL8 479 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 LDB1Q86U70 411 aaPredicted RBP17.7■□□□□ 0.42
PTPN6-204ENST00000456013 TLK2Q86UE8 772 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 SPPL2CQ8IUH8 684 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 MIER2Q8N344 545 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 OR6P1Q8NGX9 317 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 CASP10Q92851 521 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 PAAF1Q9BRP4 392 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 ADI1Q9BV57 179 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 IL1RL2Q9HB29 575 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 POLR3BQ9NW08 1133 aaPredicted RBP17.7■□□□□ 0.42
PTPN6-204ENST00000456013 ACTR3BQ9P1U1 418 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 FNIP2Q9P278 1114 aa17.7■□□□□ 0.42
PTPN6-204ENST00000456013 C17orf102A2RUQ5 167 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 CASTOR2A6NHX0 329 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 ZNF701M0R085 212 aaPredicted RBP17.69■□□□□ 0.42
PTPN6-204ENST00000456013 FXYD1O00168 92 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 MATN4O95460 622 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 CD1DP15813 335 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 CAPN3P20807 821 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 GALK1P51570 392 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 RENBPP51606 427 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 MERTKQ12866 999 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 UPP1Q16831 310 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 VPS26BQ4G0F5 336 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 TTC33Q6PID6 262 aaPredicted RBP17.69■□□□□ 0.42
PTPN6-204ENST00000456013 C14orf80Q86SX3 495 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 PIM3Q86V86 326 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 PHYKPLQ8IUZ5 450 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 HDAC10Q969S8 669 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 SLC10A4Q96EP9 437 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 PKMYT1Q99640 499 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 C9orf16Q9BUW7 83 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 NOL6Q9H6R4 1146 aaKnown RBP17.69■□□□□ 0.42
PTPN6-204ENST00000456013 NT5MQ9NPB1 228 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 GID8Q9NWU2 228 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 HS3ST4Q9Y661 456 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 ANGPT2O15123 496 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 GNAO1P09471 354 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 FASP25445 335 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 PSMA4P25789 261 aaKnown RBP17.69■□□□□ 0.42
PTPN6-204ENST00000456013 CD86P42081 329 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 ARSDP51689 593 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 ATP6AP1Q15904 470 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 SLC36A3Q495N2 470 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 SPATS1Q496A3 300 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 PLEKHH3Q7Z736 793 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 ZNF786Q8N393 782 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 SH3RF2Q8TEC5 729 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 TWIST2Q8WVJ9 160 aa17.69■□□□□ 0.42
PTPN6-204ENST00000456013 LPPQ93052 612 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms