RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NECTIN3Q9NQS3 549 aa18.69■□□□□ 0.58
PTPA-223ENST00000452489 TRPC5OSA6NMA1 111 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 B4GALT4O60513 344 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 LDLRP01130 860 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 MPOP05164 745 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 ITGB5P18084 799 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 CDH5P33151 784 aaPredicted RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 SPRP35270 261 aaPredicted RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 CNSTQ6PJW8 725 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 SCARA5Q6ZMJ2 495 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 ZNF438Q7Z4V0 828 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 IFNEQ86WN2 208 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 CDR2LQ86X02 465 aaPredicted RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 GIPC2Q8TF65 315 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 FAR1Q8WVX9 515 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 RPL3LQ92901 407 aaKnown RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 NODALQ96S42 347 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 OMDQ99983 421 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 SMOC2Q9H3U7 446 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 TNFRSF12AQ9NP84 129 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 TOR4AQ9NXH8 423 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 ABI2Q9NYB9 513 aaPredicted RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 SRCAPQ6ZRS2 3230 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 C9JVG2 144 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 CST3P01034 146 aaPredicted RBP18.68■□□□□ 0.58
PTPA-223ENST00000452489 FCGR1AP12314 374 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 IL12AP29459 219 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 GBE1Q04446 702 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 OLIG2Q13516 323 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 TAS1R3Q7RTX0 852 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 MCFD2Q8NI22 146 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 GRPEL2Q8TAA5 225 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 SLA2Q9H6Q3 261 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 CISHQ9NSE2 258 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 EXD2Q9NVH0 621 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 ACTR3BQ9P1U1 418 aa18.68■□□□□ 0.58
PTPA-223ENST00000452489 DLX3O60479 287 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 CHRM3P20309 590 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 CES1P23141 567 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 PTGS2P35354 604 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 TPD52P55327 224 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 EMX1Q04741 257 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 POU5F1BQ06416 359 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 LAIR2Q6ISS4 152 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ZNF544Q6NX49 715 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 HID1Q8IV36 788 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 SYTL1Q8IYJ3 562 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 STON2Q8WXE9 905 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ELMO1Q92556 727 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 PIK3R3Q92569 461 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 CMTM6Q9NX76 183 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 FBXL12Q9NXK8 326 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 MAP10Q9P2G4 905 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ZNF639Q9UID6 485 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 MTF2Q9Y483 593 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 LOXHD1Q8IVV2 1947 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 A8MX80 341 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 AVPR1AP37288 418 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ARSFP54793 590 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 POU6F2P78424 691 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 GALNT1Q10472 559 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 DGCR6Q14129 220 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 CA9Q16790 459 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 SDE2Q6IQ49 451 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 FUNDC1Q8IVP5 155 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 DNERQ8NFT8 737 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ZNF300Q96RE9 604 aaPredicted RBP18.67■□□□□ 0.58
PTPA-223ENST00000452489 RIT2Q99578 217 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ASPSCR1Q9BZE9 553 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 ADAM28Q9UKQ2 775 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 POLHQ9Y253 713 aa18.67■□□□□ 0.58
PTPA-223ENST00000452489 SCO1O75880 301 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 CABYRO75952 493 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 ALOX12P18054 663 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 TGM2P21980 687 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 YWHAQP27348 245 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 MAP2K4P45985 399 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 YIF1BQ5BJH7 314 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 TRNP1Q6NT89 227 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 TAF2Q6P1X5 1199 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 SCYL2Q6P3W7 929 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 HACD2Q6Y1H2 254 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 ILDR2Q71H61 639 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 ADAMTSL2Q86TH1 951 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 P2RY8Q86VZ1 359 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 SPATA6LQ8N4H0 392 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 KCTD4Q8WVF5 259 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 GAD1Q99259 594 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 DNAI2Q9GZS0 605 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 TOR3AQ9H497 397 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 FBRSL1Q9HCM7 1045 aaKnown RBP18.66■□□□□ 0.58
PTPA-223ENST00000452489 MAT2BQ9NZL9 334 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 FBXO5Q9UKT4 447 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 SLC39A10Q9ULF5 831 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 GPIP06744 558 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 THRBP10828 461 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 CD19P15391 556 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 GRK3P35626 688 aa18.66■□□□□ 0.58
PTPA-223ENST00000452489 ACTR2P61160 394 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms