RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SRSF5Q13243 272 aaKnown RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 CUL1Q13616 776 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 ANGPT1Q15389 498 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 USP39Q53GS9 565 aaKnown RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 CASC4Q6P4E1 433 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 PDIK1LQ8N165 341 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 DEFB119Q8N690 84 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 OR2T34Q8NGX1 318 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 BRSK1Q8TDC3 778 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 SIGLEC10Q96LC7 697 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 FRMD8Q9BZ67 464 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 C6orf106Q9H6K1 298 aaPredicted RBP18■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZFYVE1Q9HBF4 777 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 PREBQ9HCU5 417 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 BPIFA1Q9NP55 256 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 TCAF1Q9Y4C2 921 aa18■□□□□ 0.47
TRAPPC4-203ENST00000447216 CCDC163A0A0D9SF12 145 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 LRRC72A6NJI9 287 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 SDR42E2A6NKP2 422 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 AP3B1O00203 1094 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 LDB2O43679 373 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 MYBL2P10244 700 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 C6P13671 934 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 GM2AP17900 193 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 MAT2AP31153 395 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 STC1P52823 247 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 TMPRSS15P98073 1019 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 PTSQ03393 145 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 PDIA2Q13087 525 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 FASTKD3Q14CZ7 662 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 ACOX1Q15067 660 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 TAF1AQ15573 450 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 CES3Q6UWW8 571 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 TMC3Q7Z5M5 1100 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 LONP2Q86WA8 852 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 ANKMY2Q8IV38 441 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 IGDCC3Q8IVU1 814 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 PPHLN1Q8NEY8 458 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 SPACA7Q96KW9 195 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 WDR83Q9BRX9 315 aaKnown RBP17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 LRFN3Q9BTN0 628 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 C1QTNF1Q9BXJ1 281 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 IL22Q9GZX6 179 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 TRABDQ9H4I3 376 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 SAYSD1Q9NPB0 183 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 CHRAC1Q9NRG0 131 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 CHMP2BQ9UQN3 213 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 MAD1L1Q9Y6D9 718 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 PLXNB3Q9ULL4 1909 aa17.99■□□□□ 0.47
TRAPPC4-203ENST00000447216 CCL22O00626 93 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 GALR2O43603 387 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 LZTS3O60299 673 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 NDUFS2O75306 463 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 CRTAMO95727 393 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 SP9P0CG40 484 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZNF30P17039 623 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 LPOP22079 712 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ADRA1DP25100 572 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ETV3P41162 512 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ELK3P41970 407 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZNF140P52738 457 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 VSNL1P62760 191 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 FGL2Q14314 439 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ELF2Q15723 593 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 PCID2Q5JVF3 399 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 Q6ZVL8 140 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 HORMAD1Q86X24 394 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 CBARPQ8N350 705 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 OR4K2Q8NGD2 314 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 OR13C4Q8NGS5 318 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 DNAJC1Q96KC8 554 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 COQ10AQ96MF6 247 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZNF778Q96MU6 729 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 RANBP9Q96S59 729 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 SRPK1Q96SB4 655 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 FAM129AQ9BZQ8 928 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 KDM4CQ9H3R0 1056 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 IL17CQ9P0M4 197 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 SAMD15Q9P1V8 674 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 MTRF1LQ9UGC7 380 aaKnown RBP17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 SLC2A6Q9UGQ3 507 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 CD84Q9UIB8 345 aa17.98■□□□□ 0.47
TRAPPC4-203ENST00000447216 HEATR9A2RTY3 570 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 MROH6A6NGR9 719 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 C2orf81A6NN90 581 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 E7ESA3 106 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 H0Y858 1186 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 STX7O15400 261 aaKnown RBP17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 MAP3K13O43283 966 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 RECQL5O94762 991 aaPredicted RBP17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 FSBPO95073 299 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 FAM153BP0C7A2 387 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 NMBRP28336 390 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 RPS21P63220 83 aaKnown RBP17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 ZNF284Q2VY69 593 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 FAM153CQ494X1 144 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 TMEM259Q4ZIN3 620 aa17.97■□□□□ 0.47
TRAPPC4-203ENST00000447216 TSTD2Q5T7W7 516 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms