RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 HIF1AQ16665 826 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 PCID2Q5JVF3 399 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 DENND2CQ68D51 928 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 KIAA0895LQ68EN5 471 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 ZDHHC24Q6UX98 284 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 NLRP9Q7RTR0 991 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 TRIM69Q86WT6 500 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 RAVER1Q8IY67 606 aaKnown RBP15.79■□□□□ 0.12
USP40-206ENST00000443711 CBARPQ8N350 705 aaPredicted RBP15.79■□□□□ 0.12
USP40-206ENST00000443711 PPHLN1Q8NEY8 458 aaKnown RBP15.79■□□□□ 0.12
USP40-206ENST00000443711 CADM4Q8NFZ8 388 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 RUBCNQ92622 972 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 PRRX2Q99811 253 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 ZDHHC18Q9NUE0 388 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 KCTD5Q9NXV2 234 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 ZFR2Q9UPR6 939 aaKnown RBP15.79■□□□□ 0.12
USP40-206ENST00000443711 ABCA7Q8IZY2 2146 aa15.79■□□□□ 0.12
USP40-206ENST00000443711 THADAQ6YHU6 1953 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 MAGEB16A2A368 324 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 IGLON5A6NGN9 336 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 AURKAO14965 403 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 STX7O15400 261 aaKnown RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 TM7SF2O76062 418 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 C6P13671 934 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 CARSP49589 748 aaKnown RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 RPL6Q02878 288 aaKnown RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 CBLBQ13191 982 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 ACOX1Q15067 660 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 BBS9Q3SYG4 887 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 FNBP1LQ5T0N5 605 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 SEL1L3Q68CR1 1132 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 HSD11B1LQ7Z5J1 315 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 PTCD2Q8WV60 388 aaKnown RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 ASB12Q8WXK4 309 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 SIGLEC10Q96LC7 697 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 COQ10AQ96MF6 247 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 PWWP2AQ96N64 755 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 C1QTNF2Q9BXJ5 285 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 SLC17A9Q9BYT1 436 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 TSPYL1Q9H0U9 437 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 C6orf106Q9H6K1 298 aaPredicted RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 RAD18Q9NS91 495 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 SYBUQ9NX95 663 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 PKD2L2Q9NZM6 624 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 SAMD15Q9P1V8 674 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 MTRF1LQ9UGC7 380 aaKnown RBP15.78■□□□□ 0.12
USP40-206ENST00000443711 PKP3Q9Y446 797 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 TCAF1Q9Y4C2 921 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 PCDHGA2Q9Y5H1 932 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 ARL5AQ9Y689 179 aa15.78■□□□□ 0.12
USP40-206ENST00000443711 RGSL1A5PLK6 1076 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 MROH6A6NGR9 719 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 METTL12A8MUP2 240 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 C10orf142B7Z368 130 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 WNT9AO14904 365 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 EIF3HO15372 352 aaKnown RBP eCLIP15.77■□□□□ 0.12
USP40-206ENST00000443711 LDB2O43679 373 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 FSBPO95073 299 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 SLC4A1P02730 911 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 C1SP09871 688 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 BCKDHBP21953 392 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 NUDT1P36639 197 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 PPP2CBP62714 309 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 PPP2CAP67775 309 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CRADDP78560 199 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CREB5Q02930 508 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 DHX9Q08211 1270 aaKnown RBP15.77■□□□□ 0.12
USP40-206ENST00000443711 MTM1Q13496 603 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 ERCC6LQ2NKX8 1250 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 ZNF284Q2VY69 593 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CCDC38Q502W7 563 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CASC4Q6P4E1 433 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CEP128Q6ZU80 1094 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 CENPUQ71F23 418 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 TECPR1Q7Z6L1 1165 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 NRSN1Q8IZ57 195 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 EIF1ADQ8N9N8 165 aaKnown RBP15.77■□□□□ 0.12
USP40-206ENST00000443711 ZBTB44Q8NCP5 570 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 STYXQ8WUJ0 223 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 FOXJ1Q92949 421 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 LRRC39Q96DD0 335 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 C19orf43Q9BQ61 176 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 C1QTNF7Q9BXJ2 289 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 ANKZF1Q9H8Y5 726 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 MRM3Q9HC36 420 aaKnown RBP15.77■□□□□ 0.12
USP40-206ENST00000443711 IL17CQ9P0M4 197 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.77■□□□□ 0.12
USP40-206ENST00000443711 RIMKLBQ9ULI2 386 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 COQ6Q9Y2Z9 468 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 V9GYY5 206 aaPredicted RBP15.77■□□□□ 0.12
USP40-206ENST00000443711 SPAG17Q6Q759 2223 aa15.77■□□□□ 0.12
USP40-206ENST00000443711 LATO43561 262 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 HRO43593 1189 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 BUD23O43709 281 aaKnown RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 RECQL5O94762 991 aaPredicted RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 MAT2AP31153 395 aaKnown RBP15.76■□□□□ 0.11
USP40-206ENST00000443711 SPINT3P49223 89 aa15.76■□□□□ 0.11
USP40-206ENST00000443711 PDIA2Q13087 525 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms