RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 LRRN4Q8WUT4 740 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 HAUS1Q96CS2 278 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 MCCC1Q96RQ3 725 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-216ENST00000439475 TSGA10Q9BZW7 698 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 LACRTQ9GZZ8 138 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 SLC25A51Q9H1U9 297 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 PHPT1Q9NRX4 125 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-216ENST00000439475 UCKL1Q9NWZ5 548 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 KLHL8Q9P2G9 620 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-216ENST00000439475 KLQ9UEF7 1012 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 REXO2Q9Y3B8 237 aaKnown RBP10.48□□□□□ -0.73
MCF2L-216ENST00000439475 DUSP10Q9Y6W6 482 aa10.48□□□□□ -0.73
MCF2L-216ENST00000439475 COL5A1P20908 1838 aaPredicted RBP10.48□□□□□ -0.73
MCF2L-216ENST00000439475 MACROD2A1Z1Q3 448 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GOLGA6CA6NDK9 693 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 NPIPB15A6NHN6 443 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 H7C0C1 242 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 APOC4-APOC2K7ER74 178 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 K7ESM1 405 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TRIM38O00635 465 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TNFRSF10CO14798 259 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ARHGAP6O43182 974 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 APOC2P02655 101 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GOLGA6DP0CG33 693 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 JUPP14923 745 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ACP1P24666 158 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TEAD1P28347 426 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TRIM23P36406 574 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ATP5OP48047 213 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 HK3P52790 923 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 KIAA1024LP59773 190 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 SRP54P61011 504 aaKnown RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 SKOR1P84550 965 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ZBTB17Q13105 803 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 DNAJC3Q13217 504 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 SLC14A2Q15849 920 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 LRRC66Q68CR7 880 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 RAET1GQ6H3X3 334 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ZCCHC8Q6NZY4 707 aaKnown RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 LVRNQ6Q4G3 990 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 Q6ZVL8 140 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ZC3H18Q86VM9 953 aaKnown RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TMPRSS12Q86WS5 348 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GKN2Q86XP6 184 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TMEM139Q8IV31 216 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 NRSN1Q8IZ57 195 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 CBARPQ8N350 705 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 CNTD1Q8N815 330 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF548Q8NEK5 533 aaPredicted RBP10.47□□□□□ -0.73
MCF2L-216ENST00000439475 LPCAT1Q8NF37 534 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 OR56A4Q8NGH8 313 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 HTR3CQ8WXA8 447 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 KRT35Q92764 455 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 DTD2Q96FN9 168 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 COQ10AQ96MF6 247 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 LYSMD1Q96S90 227 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 HEMGNQ9BXL5 484 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 OSBPL8Q9BZF1 889 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 WDR26Q9H7D7 661 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GLOD4Q9HC38 313 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TOR4AQ9NXH8 423 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GOLGA6AQ9NYA3 693 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 PKD2L2Q9NZM6 624 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 MOSPD1Q9UJG1 213 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 TRHDEQ9UKU6 1024 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 OR1A2Q9Y585 309 aa10.47□□□□□ -0.73
MCF2L-216ENST00000439475 GRID2IPA4D2P6 1211 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 RGSL1A5PLK6 1076 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CAPN8A6NHC0 703 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 DKK1O94907 266 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 TOP3BO95985 862 aaKnown RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CKMT1AP12532 417 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 SPINK2P20155 84 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 LHCGRP22888 699 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 PTPN3P26045 913 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 ACADVLP49748 655 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CDK18Q07002 472 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 DPTQ07507 201 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 C1orf61Q13536 156 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 PEX6Q13608 980 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 PRKD1Q15139 912 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 PROX2Q3B8N5 592 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 TPRG1LQ5T0D9 272 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CRTC1Q6UUV9 634 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 DHRS13Q6UX07 377 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 ZNF765Q7L2R6 523 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 HSD11B1LQ7Z5J1 315 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 TECPR1Q7Z6L1 1165 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 RBFAQ8N0V3 343 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 PLA2G15Q8NCC3 412 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 TSACCQ96A04 125 aaPredicted RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 FUBP1Q96AE4 644 aaKnown RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 LRRC45Q96CN5 670 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 AP2M1Q96CW1 435 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 IMP4Q96G21 291 aaKnown RBP10.46□□□□□ -0.73
MCF2L-216ENST00000439475 APOLD1Q96LR9 279 aa10.46□□□□□ -0.73
MCF2L-216ENST00000439475 CNTNAP3BQ96NU0 1288 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms