RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 CCNB1P14635 433 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DESP17661 470 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LHCGRP22888 699 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TEAD1P28347 426 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 MIPP30301 263 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 ARSDP51689 593 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 MAZP56270 477 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 POLR2LP62875 67 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CDK3Q00526 305 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SLC10A7Q0GE19 358 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 LBRQ14739 615 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 C16orf72Q14CZ0 275 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DPYSL2Q16555 572 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 HEATR4Q86WZ0 1026 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 JAMLQ86YT9 394 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 KIAA1524Q8TCG1 905 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 PTCD2Q8WV60 388 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 NUS1Q96E22 293 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 DTD2Q96FN9 168 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SCARF2Q96GP6 870 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 MCCC1Q96RQ3 725 aaPredicted RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SEMA6CQ9H3T2 930 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CLMPQ9H6B4 373 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CYP4F12Q9HCS2 524 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SPATS2LQ9NUQ6 558 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 TRNAU1APQ9NX07 287 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 CWC15Q9P013 229 aaKnown RBP10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 SLC17A4Q9Y2C5 497 aa10.96□□□□□ -0.65
SPTLC1P4-201ENST00000435997 BOD1L1Q8NFC6 3051 aa10.96□□□□□ -0.66
SPTLC1P4-201ENST00000435997 LRRK1Q38SD2 2015 aa10.96□□□□□ -0.66
SPTLC1P4-201ENST00000435997 SCN8AQ9UQD0 1980 aa10.96□□□□□ -0.66
SPTLC1P4-201ENST00000435997 A0A1W2PQ67 120 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PYCARD-AS1I3L0S3 204 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PSMD11O00231 422 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 DFFAO00273 331 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PDE2AO00408 941 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 HGSO14964 777 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 WISP1O95388 367 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 SOD1P00441 154 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 FGF1P05230 155 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 CEACAM5P06731 702 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 CCDC172P0C7W6 258 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 IL1R2P27930 398 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 HSPA9P38646 679 aaKnown RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 SCNN1BP51168 640 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 RENBPP51606 427 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ACOX1Q15067 660 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 MAP9Q49MG5 647 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 E4F1Q66K89 784 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ZNF574Q6ZN55 896 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 VASH2Q86V25 355 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PGBD5Q8N414 524 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 LZTR1Q8N653 840 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ANKRD20A12PQ8NF67 263 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 EXTL1Q92935 676 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 USP7Q93009 1102 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 NUDCD1Q96RS6 583 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 SEMA3CQ99985 751 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 NUDT22Q9BRQ3 303 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 FUCA2Q9BTY2 467 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 GSDMCQ9BYG8 508 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 DPEP2Q9H4A9 486 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 CARS2Q9HA77 564 aaKnown RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 RDH14Q9HBH5 336 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 KCTD5Q9NXV2 234 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 TAAR2Q9P1P5 351 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PCDHGA3Q9Y5H0 932 aa10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 TLN1Q9Y490 2541 aaKnown RBP10.95□□□□□ -0.66
SPTLC1P4-201ENST00000435997 IGHV5-10-1A0A0J9YXX1 117 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 NPIPB15A6NHN6 443 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 CYSRT1A8MQ03 144 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PRPSAP2O60256 369 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 MAFKO60675 156 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 IVLP07476 585 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 THRAP10827 490 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 GZMAP12544 262 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 VIPR1P32241 457 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 CSF2RBP32927 897 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PCK1P35558 622 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ETV3P41162 512 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PRKCIP41743 596 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 GPR3P46089 330 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 DPTQ07507 201 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ILF3Q12906 894 aaKnown RBP eCLIP10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 TRAF2Q12933 501 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 NFATC3Q12968 1075 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 SQSTM1Q13501 440 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ARHGEF7Q14155 803 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 STX1AQ16623 288 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 PPP6R3Q5H9R7 873 aaPredicted RBP10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 RALGPS1Q5JS13 557 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 MANEAQ5SRI9 462 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 USP53Q70EK8 1073 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 HSD11B1LQ7Z5J1 315 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 ZFAND4Q86XD8 727 aa10.94□□□□□ -0.66
SPTLC1P4-201ENST00000435997 NAGSQ8N159 534 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms