RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 PANX3Q96QZ0 392 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 OSBPL6Q9BZF3 934 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PRDM16Q9HAZ2 1276 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ZFYVE1Q9HBF4 777 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 C6orf203Q9P0P8 240 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CD84Q9UIB8 345 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RNF112Q9ULX5 631 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 MYH7BA7E2Y1 1941 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TCRBV21S2A2A0A5A6 115 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LRCH4O75427 683 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 WFS1O76024 890 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CATP04040 527 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LRPAP1P30533 357 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 FMO4P31512 558 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 HNF4AP41235 474 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SERPINB8P50452 374 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PEX6Q13608 980 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 FAM83EQ2M2I3 478 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 INAVAQ3KP66 663 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TCHHL1Q5QJ38 904 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ZNF470Q6ECI4 717 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TXNDC5Q8NBS9 432 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 MYO19Q96H55 970 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RNF157Q96PX1 679 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SLC38A3Q99624 504 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 DCUN1D5Q9BTE7 237 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 GPR174Q9BXC1 333 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LHX5Q9H2C1 402 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CRTAC1Q9NQ79 661 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SLC27A6Q9Y2P4 619 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 COMMD3-BMI1R4GMX3 469 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 IGKV6D-21A0A0A0MT36 114 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RNF103-CHMP3A0A140T963 221 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PSMB4P28070 264 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 IRS1P35568 1242 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 GALK1P51570 392 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 GDF10P55107 478 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CSTF1Q05048 431 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SUZ12Q15022 739 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 OASLQ15646 514 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SLC39A4Q6P5W5 647 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CHST15Q7LFX5 561 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CRYBG2Q8N1P7 616 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 FAM46DQ8NEK8 389 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 C8orf48Q96LL4 319 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PRPF18Q99633 342 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TBL1YQ9BQ87 522 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CCDC134Q9H6E4 229 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 GPAMQ9HCL2 828 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CYP4F12Q9HCS2 524 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RAD18Q9NS91 495 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 NSMCE4AQ9NXX6 385 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 BACE2Q9Y5Z0 518 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LCHNA4D1U4 455 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 NEMP2A6NFY4 417 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 TTC36A6NLP5 189 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 GNGT2O14610 69 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 SUPT7LO94864 414 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 LYNP07948 512 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 PCNAP12004 261 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 CXCL12P48061 93 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ATXN1P54253 815 aaKnown RBP10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ZNF776Q68DI1 518 aaPredicted RBP10.66□□□□□ -0.7
TCOF1-204ENST00000427724 KLHL35Q6PF15 583 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ENPP7Q6UWV6 458 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 IFNEQ86WN2 208 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 BBS7Q8IWZ6 715 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 OR10T2Q8NGX3 314 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 CRYGNQ8WXF5 182 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 CCDC138Q96M89 665 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 NMUR2Q9GZQ4 415 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ACTR8Q9H981 624 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 IGKV6-21A0A0C4DH24 114 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 NDUFB5O43674 189 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 PEX11AO75192 247 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 VNN1O95497 513 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 MT-CO1P00395 513 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 VAV1P15498 845 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 SLC25A3Q00325 362 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 LRRC74AQ0VAA2 488 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 LIN52Q52LA3 116 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ARSIQ5FYB1 569 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 C1orf220Q5T0J3 134 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 MARCH8Q5T0T0 291 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ARHGAP17Q68EM7 881 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 TAS1R1Q7RTX1 841 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 GALNT13Q8IUC8 556 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 RNF148Q8N7C7 305 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 SPPL3Q8TCT6 385 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 NCLNQ969V3 563 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 COPS8Q99627 209 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 NMUR1Q9HB89 426 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ETNK2Q9NVF9 386 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 LRP5O75197 1615 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 FFAR2O15552 330 aa10.66□□□□□ -0.7
TCOF1-204ENST00000427724 ZBTB14O43829 449 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms