RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 NUS1Q96E22 293 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 MRPL40Q9NQ50 206 aaKnown RBP21.55■■□□□ 1.04
CDCP1-202ENST00000425231 KCTD5Q9NXV2 234 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 INTUQ9ULD6 942 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 ITPR1Q14643 2758 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 FAM208BQ5VWN6 2430 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 A0A0U1RQS6 177 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 LRRD1A4D1F6 860 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 PSMD11O00231 422 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 TNFRSF10CO14798 259 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 CTPS1P17812 591 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 MX2P20592 715 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 CES1P23141 567 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 ETV3P41162 512 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 DENND2CQ68D51 928 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 C19orf48Q6RUI8 117 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 Q6ZVL8 140 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 TPCN2Q8NHX9 752 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 DTD2Q96FN9 168 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 DEPDC7Q96QD5 511 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 SMIM14Q96QK8 99 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 WDR26Q9H7D7 661 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 PADI4Q9UM07 663 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 DOLKQ9UPQ8 538 aa21.55■■□□□ 1.04
CDCP1-202ENST00000425231 A0A087WV48 116 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 HLA-DQB2P05538 268 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 KELP23276 732 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 NIPAL4Q0D2K0 466 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 LRRC38Q5VT99 294 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 USP45Q70EL2 814 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 TECPR1Q7Z6L1 1165 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 VSIG1Q86XK7 387 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 GKN2Q86XP6 184 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.54■■□□□ 1.04
CDCP1-202ENST00000425231 TC2NQ8N9U0 490 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 SCG3Q8WXD2 468 aaKnown RBP21.54■■□□□ 1.04
CDCP1-202ENST00000425231 TEX101Q9BY14 249 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 LHX6Q9UPM6 363 aa21.54■■□□□ 1.04
CDCP1-202ENST00000425231 A0A0J9YYE9 177 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 CASC3O15234 703 aaKnown RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 TLX3O43711 291 aaPredicted RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 CSO75390 466 aaKnown RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 PRLP01236 227 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 TRBC1P01850 177 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 PPIDQ08752 370 aaKnown RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 ARHGEF7Q14155 803 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 SLC9A4Q6AI14 798 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 CRTC1Q6UUV9 634 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 CCDC13Q8IYE1 715 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 ARL10Q8N8L6 244 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 CCNYQ8ND76 341 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 HNRNPLLQ8WVV9 542 aaKnown RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 NAT6Q93015 286 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 LGMNQ99538 433 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 TDRD1Q9BXT4 1180 aaKnown RBP21.53■■□□□ 1.04
CDCP1-202ENST00000425231 TRIM5Q9C035 493 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 GULP1Q9UBP9 304 aa21.53■■□□□ 1.04
CDCP1-202ENST00000425231 ZFYVE26Q68DK2 2539 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 BRINP1O60477 761 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 MYCLP1P12525 358 aaPredicted RBP21.52■■□□□ 1.04
CDCP1-202ENST00000425231 SLC1A1P43005 524 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 PTSQ03393 145 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 ISXQ2M1V0 245 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 COL28A1Q2UY09 1125 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 RFLNAQ6ZTI6 216 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 NDUFAF2Q8N183 169 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 CNTD1Q8N815 330 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 KYQ8NBH2 561 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 TMEM168Q9H0V1 697 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 SIRPGQ9P1W8 387 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 GPR34Q9UPC5 381 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 CHKBQ9Y259 395 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 TTLL3Q9Y4R7 772 aa21.52■■□□□ 1.04
CDCP1-202ENST00000425231 KCNK1O00180 336 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 PDE2AO00408 941 aaPredicted RBP21.51■■□□□ 1.03
CDCP1-202ENST00000425231 JCHAINP01591 159 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 FUCA1P04066 466 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 DPTQ07507 201 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 LRRC66Q68CR7 880 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 HEATR4Q86WZ0 1026 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 CCDC3Q9BQI4 270 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 CYP4F12Q9HCS2 524 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 PHPT1Q9NRX4 125 aaPredicted RBP21.51■■□□□ 1.03
CDCP1-202ENST00000425231 HAUS2Q9NVX0 235 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 HYOU1Q9Y4L1 999 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 HEY1Q9Y5J3 304 aa21.51■■□□□ 1.03
CDCP1-202ENST00000425231 PRSS38A1L453 326 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 USP12O75317 370 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 CEACAM5P06731 702 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 MMP2P08253 660 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 COMTP21964 271 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 TEAD1P28347 426 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 EIF2S3P41091 472 aaKnown RBP21.5■■□□□ 1.03
CDCP1-202ENST00000425231 IFI35P80217 286 aaPredicted RBP21.5■■□□□ 1.03
CDCP1-202ENST00000425231 CDK3Q00526 305 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 OGFOD3Q6PK18 319 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 RHOT1Q8IXI2 618 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 GPR156Q8NFN8 814 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 CCL4L1Q8NHW4 92 aa21.5■■□□□ 1.03
CDCP1-202ENST00000425231 RNF25Q96BH1 459 aaPredicted RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms