RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
TMEM53-206ENST00000420706 ITM2BQ9Y287 266 aa12.5□□□□□ -0.41
TMEM53-206ENST00000420706 TTC28Q96AY4 2481 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 UQCRHLA0A096LP55 91 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 CCDC78A2IDD5 438 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 H0Y858 1186 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PSMD11O00231 422 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 NEMP1O14524 444 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 STX7O15400 261 aaKnown RBP12.49□□□□□ -0.41
TMEM53-206ENST00000420706 MMP20O60882 483 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 USP1O94782 785 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 UQCRHP07919 91 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 C1SP09871 688 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PGAM1P18669 254 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
TMEM53-206ENST00000420706 LIG3P49916 1009 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 STC1P52823 247 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PDE1BQ01064 536 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 KYNUQ16719 465 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 SKIDA1Q1XH10 827 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 ANKRD20A4Q4UJ75 823 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 TMEM31Q5JXX7 168 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
TMEM53-206ENST00000420706 EMBQ6PCB8 327 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 FAM124AQ86V42 546 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PALM2Q8IXS6 379 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 FBXL6Q8N531 539 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 OR4K2Q8NGD2 314 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 OR13C4Q8NGS5 318 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PEX13Q92968 403 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 CAVIN3Q969G5 261 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 C1QTNF1Q9BXJ1 281 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 TPSD1Q9BZJ3 242 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 BTBD1Q9H0C5 482 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 KDM4CQ9H3R0 1056 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 SEMA4AQ9H3S1 761 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 PLAC1Q9HBJ0 212 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 SGK2Q9HBY8 427 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 LRRC4CQ9HCJ2 640 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 BPIFA1Q9NP55 256 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 TREX1Q9NSU2 369 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 NLE1Q9NVX2 485 aaPredicted RBP12.49□□□□□ -0.41
TMEM53-206ENST00000420706 NINJ2Q9NZG7 142 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 SLC2A6Q9UGQ3 507 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 CYP8B1Q9UNU6 501 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 RPS6KL1Q9Y6S9 549 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 FAM169AQ9Y6X4 670 aa12.49□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3DA0A087WVF3 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3IA0A087WXS9 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3EA0A087X179 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3KA0A087X1G2 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ZCWPW2A0A1B0GU75 182 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 CCDC151A5D8V7 595 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3FA6NER0 549 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3LB9A6J9 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF217O75362 1048 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ERLIN1O75477 346 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 PCDH8O95206 1070 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TTC4O95801 387 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 POLBP06746 335 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ELFN1P0C7U0 828 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3HP0C7X1 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 GM2AP17900 193 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 OXTRP30559 389 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 SSTR1P30872 391 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 HOXA6P31267 233 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ACSL1P33121 698 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF140P52738 457 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 PMS2P54278 862 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ADPRHP54922 357 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 GPX6P59796 221 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TMPRSS15P98073 1019 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ACVR1Q04771 509 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 MAP7D1Q3KQU3 841 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 MAP9Q49MG5 647 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 STEAP4Q687X5 459 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3GQ6DHY5 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3CQ6IPX1 549 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 NEK5Q6P3R8 708 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 UNC5AQ6ZN44 842 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 RFLNAQ6ZTI6 216 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 HSD11B1LQ7Z5J1 315 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TECPR1Q7Z6L1 1165 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 C1orf210Q8IVY1 113 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 RAVER1Q8IY67 606 aaKnown RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBC1D3Q8IZP1 549 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 DTWD2Q8NBA8 298 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 OR13J1Q8NGT2 312 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 CXorf40AQ8TE69 158 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 ZNF669Q96BR6 464 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 CFAP36Q96G28 342 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 CDKN2AIPNLQ96HQ2 116 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 DNAJC1Q96KC8 554 aaKnown RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 TBATAQ96M53 351 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 COQ10AQ96MF6 247 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 C19orf43Q9BQ61 176 aa12.48□□□□□ -0.41
TMEM53-206ENST00000420706 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 PRMT8Q9NR22 394 aaPredicted RBP12.48□□□□□ -0.41
TMEM53-206ENST00000420706 WSB2Q9NYS7 404 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms