RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 ARL10Q8N8L6 244 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 GPR156Q8NFN8 814 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 OR8K1Q8NGG5 319 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 OR56A4Q8NGH8 313 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 CCL4L1Q8NHW4 92 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 ARRDC2Q8TBH0 407 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 PDCD6IPQ8WUM4 868 aaKnown RBP11.05□□□□□ -0.64
SSBP3-206ENST00000420121 PTCD2Q8WV60 388 aaKnown RBP11.05□□□□□ -0.64
SSBP3-206ENST00000420121 CTNNBL1Q8WYA6 563 aaPredicted RBP11.05□□□□□ -0.64
SSBP3-206ENST00000420121 RAPGEF5Q92565 580 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 FGF11Q92914 225 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 NAT6Q93015 286 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 FATE1Q969F0 183 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 DTD2Q96FN9 168 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 SCRN2Q96FV2 425 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 HIC2Q96JB3 615 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 TSGA13Q96PP4 275 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 SEMA3CQ99985 751 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 CCDC3Q9BQI4 270 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 TEX101Q9BY14 249 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 TMEM168Q9H0V1 697 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 ABHD10Q9NUJ1 306 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 EVA1BQ9NVM1 165 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 ST14Q9Y5Y6 855 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 ATMQ13315 3056 aa11.05□□□□□ -0.64
SSBP3-206ENST00000420121 FASNP49327 2511 aaKnown RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 BAHCC1Q9P281 2608 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 A0A1W2PQM1 296 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 C3orf70A6NLC5 250 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 PSMD11O00231 422 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 CACNB4O00305 520 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 KALRNO60229 2985 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 NOBOXO60393 691 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 MFAP3LO75121 409 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 TCEA3O75764 348 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 MTA2O94776 668 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 SOD1P00441 154 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 PRLP01236 227 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 TNFP01375 233 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 HLA-DQB2P05538 268 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 ALPIP09923 528 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 TMEM253P0C7T8 217 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 MYCLP1P12525 358 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 CTSEP14091 401 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 CTPS1P17812 591 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 CCNCP24863 283 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 MAN1A1P33908 653 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 ETV3P41162 512 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 SSR1P43307 286 aaKnown RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 ABCG1P45844 678 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 LSSP48449 732 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 RPIAP49247 311 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 GABREP78334 506 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 DSC2Q02487 901 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 NIPAL4Q0D2K0 466 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 TRIM14Q14142 442 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 PDK2Q15119 407 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 SKOR2Q2VWA4 1001 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 FAM182AQ5T1J6 154 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 OGFOD3Q6PK18 319 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 IGF2-ASQ6U949 168 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 Q6ZVL8 140 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 GKN2Q86XP6 184 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 NRROSQ86YC3 692 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 BBS5Q8N3I7 341 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 PLD5Q8N7P1 536 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 TPCN2Q8NHX9 752 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 GLMNQ92990 594 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 NUS1Q96E22 293 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 ATXN7L3BQ96GX2 97 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 FRMD8Q9BZ67 464 aaPredicted RBP11.04□□□□□ -0.64
SSBP3-206ENST00000420121 ABCG4Q9H172 646 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 PRORYQ9H606 182 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 WDR26Q9H7D7 661 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 POLR1BQ9H9Y6 1135 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 SPTLC3Q9NUV7 552 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 DTLQ9NZJ0 730 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 SIRPGQ9P1W8 387 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 GPR34Q9UPC5 381 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 RAI2Q9Y5P3 530 aa11.04□□□□□ -0.64
SSBP3-206ENST00000420121 CFAP46Q8IYW2 2715 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 A0A0J9YYE9 177 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 PRSS38A1L453 326 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CBFA2T2O43439 604 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 TRBC1P01850 177 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CEACAM5P06731 702 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 MMP2P08253 660 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 KRT7P08729 469 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CYP2A6P11509 494 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 KDELR1P24390 212 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 TEAD1P28347 426 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 ACTN2P35609 894 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 SKOR1P84550 965 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 CDK3Q00526 305 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 PTSQ03393 145 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 DPTQ07507 201 aa11.03□□□□□ -0.64
SSBP3-206ENST00000420121 TBX2Q13207 712 aaPredicted RBP11.03□□□□□ -0.64
SSBP3-206ENST00000420121 IFI16Q16666 785 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms