RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 ACRBPQ8NEB7 543 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAFAQ8NHW3 353 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIM43Q96BQ3 446 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC127Q96BQ5 260 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF668Q96K58 619 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC42Q96M95 316 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ADPGKQ9BRR6 497 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 FAM213AQ9BRX8 229 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 NTPCRQ9BSD7 190 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 VN1R3Q9BXE9 311 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 INTS2Q9H0H0 1204 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 XPNPEP3Q9NQH7 507 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 AGPAT5Q9NUQ2 364 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRMT7Q9NVM4 692 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 DMAC2Q9NW81 257 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 ASIC5Q9NY37 505 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 RBAKQ9NYW8 714 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 MGAT4CQ9UBM8 478 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 AGO2Q9UKV8 859 aaKnown RBP4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 L1RE1Q9UN81 338 aa4.01□□□□□ -1.77
HMGB3P20-201ENST00000417997 IGKV6-21A0A0C4DH24 114 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 C17orf102A2RUQ5 167 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 LRRIQ3A6PVS8 624 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ISM1B1AKI9 464 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 M0QZ92 97 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 EPHB6O15197 1021 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 OGTO15294 1046 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 P4HA2O15460 535 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CLDN3O15551 220 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KRT86O43790 486 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KIF5CO60282 957 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DUSP11O75319 330 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TOM1L1O75674 476 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 MT-CO3P00414 261 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 VTNP04004 478 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SERPING1P05155 500 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM191BP0C7N4 346 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SMIM10L2AP0DMW4 78 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SMIM10L2BP0DMW5 78 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ACTN1P12814 892 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CYBAP13498 195 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 UCHL3P15374 230 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 FERP16591 822 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TPH1P17752 444 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ITGB6P18564 788 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TNNI1P19237 187 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 PON1P27169 355 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GTF2H1P32780 548 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 STAT1P42224 750 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GCLMP48507 274 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DIO1P49895 249 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GATMP50440 423 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 PTENP60484 403 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GNG11P61952 73 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 BEX3Q00994 111 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 MAP2K1Q02750 393 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRKCZQ05513 592 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 NCBP1Q09161 790 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KLHL30Q0D2K2 578 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 PSMD6Q15008 389 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 MEA1Q16626 185 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CBWD6Q4V339 395 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CBWD3Q5JTY5 395 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CBWD5Q5RIA9 395 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ATF7IP2Q5U623 682 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KLHDC7AQ5VTJ3 777 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KRT39Q6A163 491 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 NFRKBQ6P4R8 1299 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SLC39A4Q6P5W5 647 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SYT10Q6XYQ8 523 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF813Q6ZN06 617 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 DCDC5Q6ZRR9 648 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ZNF410Q86VK4 478 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CBWD2Q8IUF1 395 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CCDC170Q8IYT3 715 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 C11orf44Q8N8P7 122 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 KIF18AQ8NI77 898 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 OSR1Q8TAX0 266 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CD99L2Q8TCZ2 262 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 RAET1EQ8TD07 263 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 PRPF31Q8WWY3 499 aaKnown RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 LRTOMTQ8WZ04 291 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TRIB2Q92519 343 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 USP6NLQ92738 828 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 SYN2Q92777 582 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 JAKMIP2Q96AA8 810 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 HMCESQ96FZ2 354 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ERO1AQ96HE7 468 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 FAM81BQ96LP2 452 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 CHP1Q99653 195 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 C16orf70Q9BSU1 422 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TSGA10Q9BZW7 698 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 ARHGAP39Q9C0H5 1083 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 FAM49AQ9H0Q0 323 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 GANQ9H2C0 597 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 WDR26Q9H7D7 661 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 NHEJ1Q9H9Q4 299 aaPredicted RBP4□□□□□ -1.77
HMGB3P20-201ENST00000417997 TMEM8AQ9HCN3 771 aa4□□□□□ -1.77
HMGB3P20-201ENST00000417997 LZTFL1Q9NQ48 299 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms