RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 RBM22Q9NW64 420 aaKnown RBP eCLIP17.89■□□□□ 0.451e-6■■□□□ 12.7
CPNE1-210ENST00000416778 GPR34Q9UPC5 381 aa17.89■□□□□ 0.45
CPNE1-210ENST00000416778 A0A0U1RQS6 177 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 A0A1W2PNU3 283 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 NPIPB15A6NHN6 443 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 NTN3O00634 580 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 DXOO77932 396 aaKnown RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 MAP3K6O95382 1288 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 MPOP05164 745 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 CYP2A6P11509 494 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 HOXB3P14651 431 aaPredicted RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 KELP23276 732 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 GJC1P36383 396 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ETV3P41162 512 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 PTSQ03393 145 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 GBE1Q04446 702 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ITKQ08881 620 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 MESDQ14696 234 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 TSR1Q2NL82 804 aaKnown RBP17.88■□□□□ 0.45
CPNE1-210ENST00000416778 DENND2CQ68D51 928 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ALG1LQ6GMV1 187 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 Q6ZVL8 140 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 TSPAN33Q86UF1 283 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 LSMEM2Q8N112 164 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 GPR156Q8NFN8 814 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ARRDC2Q8TBH0 407 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 DTD2Q96FN9 168 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 RNF157Q96PX1 679 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 SMIM14Q96QK8 99 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 CCDC3Q9BQI4 270 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 TMEM168Q9H0V1 697 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 DEF6Q9H4E7 631 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 POLR1BQ9H9Y6 1135 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ABHD10Q9NUJ1 306 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 SIRPGQ9P1W8 387 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 AMACRQ9UHK6 382 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 RABGEF1Q9UJ41 708 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 ENTPD2Q9Y5L3 495 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 RP1P56715 2156 aa17.88■□□□□ 0.45
CPNE1-210ENST00000416778 PSMD11O00231 422 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 PDE2AO00408 941 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-210ENST00000416778 TCEA3O75764 348 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 PRLP01236 227 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CEACAM5P06731 702 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CCNB1P14635 433 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CTPS1P17812 591 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 NFKBIAP25963 317 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 ARHGAP25P42331 645 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 NIPAL4Q0D2K0 466 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 TIGD7Q6NT04 549 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-210ENST00000416778 RBM44Q6ZP01 1051 aaKnown RBP17.87■□□□□ 0.45
CPNE1-210ENST00000416778 RFLNAQ6ZTI6 216 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 NLRP8Q86W28 1048 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 KYQ8NBH2 561 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CCL4L1Q8NHW4 92 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 WDR48Q8TAF3 677 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 NUS1Q96E22 293 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 ATXN7L3BQ96GX2 97 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CRELD1Q96HD1 420 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CCDC42Q96M95 316 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 ZNF578Q96N58 590 aaPredicted RBP17.87■□□□□ 0.45
CPNE1-210ENST00000416778 POLR1EQ9GZS1 481 aaKnown RBP17.87■□□□□ 0.45
CPNE1-210ENST00000416778 WDR26Q9H7D7 661 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 CYP4F12Q9HCS2 524 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 SPTLC3Q9NUV7 552 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 DTLQ9NZJ0 730 aa17.87■□□□□ 0.45
CPNE1-210ENST00000416778 C3orf70A6NLC5 250 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-210ENST00000416778 RRP8O43159 456 aaKnown RBP17.86■□□□□ 0.45
CPNE1-210ENST00000416778 MFAP3LO75121 409 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 MTA2O94776 668 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 MX2P20592 715 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 TEAD1P28347 426 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 GABREP78334 506 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 DSC2Q02487 901 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 DPTQ07507 201 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 TBX2Q13207 712 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-210ENST00000416778 LRRC69Q6ZNQ3 347 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 TAF8Q7Z7C8 310 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 SFTPA2Q8IWL1 248 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 NDUFAF2Q8N183 169 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 RNF214Q8ND24 703 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 FAM46DQ8NEK8 389 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 PRR11Q96HE9 360 aaPredicted RBP17.86■□□□□ 0.45
CPNE1-210ENST00000416778 HIC2Q96JB3 615 aa17.86■□□□□ 0.45
CPNE1-210ENST00000416778 A0A0J9YYE9 177 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 NOBOXO60393 691 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 JCHAINP01591 159 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 TRBC1P01850 177 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 MYCLP1P12525 358 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ERVPABLB-1P60509 514 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 CCL7P80098 99 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ARHGEF7Q14155 803 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 TCEAL1Q15170 157 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 SOWAHCQ53LP3 525 aaPredicted RBP17.85■□□□□ 0.45
CPNE1-210ENST00000416778 IGF2-ASQ6U949 168 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 USP45Q70EL2 814 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 HEATR4Q86WZ0 1026 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 NRROSQ86YC3 692 aa17.85■□□□□ 0.45
CPNE1-210ENST00000416778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.85■□□□□ 0.45
CPNE1-210ENST00000416778 CCNYQ8ND76 341 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms