RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 SMIM18P0DKX4 95 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 TACR2P21452 398 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 GRK2P25098 689 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ARNTP27540 789 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SLC5A2P31639 672 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 S100A5P33763 92 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 OR1D2P34982 312 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 GMPRP36959 345 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 CHRNA4P43681 627 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 TUFMP49411 452 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 CSRP3P50461 194 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 YBEYP58557 167 aaPredicted RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 RPS3AP61247 264 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 SERINC3Q13530 473 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 GRM3Q14832 879 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 C16orf72Q14CZ0 275 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 UGP2Q16851 508 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 TRMT5Q32P41 509 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.05□□□□□ -0.32
LITAF-203ENST00000413364 DCDC5Q6ZRR9 648 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 CIR1Q86X95 450 aaPredicted RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 PLD6Q8N2A8 252 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 ACVR1CQ8NER5 493 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 MYEOVQ96EZ4 313 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 BTBD9Q96Q07 612 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 CTRCQ99895 268 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 PRKD2Q9BZL6 878 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 TREX1Q9NSU2 369 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 DNMT3LQ9UJW3 386 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 DOLKQ9UPQ8 538 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 E2F8A0AVK6 867 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 VCLP18206 1134 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 RPL17P18621 184 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 PAMP19021 973 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ITKQ08881 620 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 DLG2Q15700 870 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 PCSK7Q16549 785 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 MMEL1Q495T6 779 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 KCTD21Q4G0X4 260 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 HSF5Q4G112 596 aaPredicted RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 FAM91A1Q658Y4 838 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 KIAA0930Q6ICG6 404 aaPredicted RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 UGT2A3Q6UWM9 527 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SLC39A5Q6ZMH5 540 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 KDELC2Q7Z4H8 507 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ZNF354CQ86Y25 554 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 RIN3Q8TB24 985 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 OVCA2Q8WZ82 227 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 BORCS5Q969J3 196 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 WWP1Q9H0M0 922 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 CWH43Q9H720 699 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 FBXO6Q9NRD1 293 aaPredicted RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 ZNF358Q9NW07 568 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SLC2A6Q9UGQ3 507 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SLC39A10Q9ULF5 831 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
LITAF-203ENST00000413364 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.05□□□□□ -0.32
LITAF-203ENST00000413364 MAGEC1O60732 1142 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 MMP2P08253 660 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 CCL5P13501 91 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 GABRB3P28472 473 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 OR1E1P30953 314 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 ATP5C1P36542 298 aaKnown RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 CD86P42081 329 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 SLC1A6P48664 564 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 KCNQ1P51787 676 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 MAXP61244 160 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 DSC2Q02487 901 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 C5orf22Q49AR2 442 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 VASH1Q7L8A9 365 aaPredicted RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 FAM20CQ8IXL6 584 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 LGI2Q8N0V4 545 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 TADA1Q96BN2 335 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 IGSF21Q96ID5 467 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 RANBP9Q96S59 729 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 RNF208Q9H0X6 261 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 KLHL3Q9UH77 587 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 LOC105371267A0A1B0GV96 52 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 F5H5T6 163 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 FCHO1O14526 889 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 ITM2AO43736 263 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 ACSL4O60488 711 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 PRAMEF11O60813 436 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 AHSGP02765 367 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 PCSK6P29122 969 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 POLD2P49005 469 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 SERPINH1P50454 418 aaKnown RBP13.04□□□□□ -0.32
LITAF-203ENST00000413364 AQP5P55064 265 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 IRF9Q00978 393 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 SIGIRRQ6IA17 410 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 AAGABQ6PD74 315 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 PGBD5Q8N414 524 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 SLC25A41Q8N5S1 370 aa13.04□□□□□ -0.32
LITAF-203ENST00000413364 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.04□□□□□ -0.32
LITAF-203ENST00000413364 NSL1Q96IY1 281 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms