RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 TRAF2Q12933 501 aa24.56■■□□□ 1.52
VRK2-202ENST00000412104 ACCSLQ4AC99 568 aa24.56■■□□□ 1.52
VRK2-202ENST00000412104 KHDC1Q4VXA5 237 aaKnown RBP24.56■■□□□ 1.52
VRK2-202ENST00000412104 KDM1BQ8NB78 822 aa24.56■■□□□ 1.52
VRK2-202ENST00000412104 TMA16Q96EY4 203 aaKnown RBP24.56■■□□□ 1.52
VRK2-202ENST00000412104 ZBED2Q9BTP6 218 aa24.56■■□□□ 1.52
VRK2-202ENST00000412104 TPBGLP0DKB5 382 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 EPHA3P29320 983 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 SUOXP51687 545 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CYP4F8P98187 520 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 NAA25Q14CX7 972 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 LSM12Q3MHD2 195 aaKnown RBP24.55■■□□□ 1.52
VRK2-202ENST00000412104 ACSBG2Q5FVE4 666 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 SCUBE1Q8IWY4 988 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 WFDC5Q8TCV5 224 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CMTM5Q96DZ9 223 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 AARSD1Q9BTE6 412 aaKnown RBP24.55■■□□□ 1.52
VRK2-202ENST00000412104 ADGRE3Q9BY15 652 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 ZBP1Q9H171 429 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 ALG9Q9H6U8 611 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 INTS10Q9NVR2 710 aaKnown RBP24.55■■□□□ 1.52
VRK2-202ENST00000412104 OR51B4Q9Y5P0 310 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 DENND4CQ5VZ89 1909 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 C2orf81A6NN90 581 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 LMNAP02545 664 aaKnown RBP24.55■■□□□ 1.52
VRK2-202ENST00000412104 JUNP05412 331 aaKnown RBP24.55■■□□□ 1.52
VRK2-202ENST00000412104 PSMA3P25788 255 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CSKP41240 450 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CREMQ03060 361 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 KLF10Q13118 480 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CDH18Q13634 790 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 NCEH1Q6PIU2 408 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 ACAD11Q709F0 780 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 ISCA2Q86U28 154 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 FAM217AQ8IXS0 508 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 ULK2Q8IYT8 1036 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 THTPAQ9BU02 230 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 C11orf49Q9H6J7 331 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 POPDC3Q9HBV1 291 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 VPS51Q9UID3 782 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 CDYLQ9Y232 598 aa24.55■■□□□ 1.52
VRK2-202ENST00000412104 TMEM233B4DJY2 109 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 ANKRD66B4E2M5 251 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 H0Y3Z8 333 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 TGM5O43548 720 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 CNPP09543 421 aaKnown RBP24.54■■□□□ 1.52
VRK2-202ENST00000412104 GABRR2P28476 465 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 PRDX6P30041 224 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 PLK1P53350 603 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 PDCD2Q16342 344 aaPredicted RBP24.54■■□□□ 1.52
VRK2-202ENST00000412104 INO80DQ53TQ3 878 aaPredicted RBP24.54■■□□□ 1.52
VRK2-202ENST00000412104 SH2D4BQ5SQS7 431 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 GAREM2Q75VX8 874 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 SLC22A9Q8IVM8 553 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 GPR65Q8IYL9 337 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 TTC16Q8NEE8 873 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 PAWRQ96IZ0 340 aaKnown RBP24.54■■□□□ 1.52
VRK2-202ENST00000412104 CLPTM1LQ96KA5 538 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 DCLRE1BQ9H816 532 aa24.54■■□□□ 1.52
VRK2-202ENST00000412104 FGF18O76093 207 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 HNRNPLP14866 589 aaKnown RBP eCLIP24.53■■□□□ 1.524e-6■■■■□ 19.4
VRK2-202ENST00000412104 CD1DP15813 335 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 ZNF37AP17032 561 aaPredicted RBP24.53■■□□□ 1.52
VRK2-202ENST00000412104 LPOP22079 712 aaPredicted RBP24.53■■□□□ 1.52
VRK2-202ENST00000412104 SLC25A3Q00325 362 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 BHMTQ93088 406 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 PTERQ96BW5 349 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 PHF21BQ96EK2 531 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 GTSE1Q9NYZ3 720 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 FCF1Q9Y324 198 aaKnown RBP24.53■■□□□ 1.52
VRK2-202ENST00000412104 ASB3Q9Y575 518 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 GBF1Q92538 1859 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 CDC25CP30307 473 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 KCNC1P48547 511 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 RHOAP61586 193 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 EFHBQ8N7U6 833 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 LPGAT1Q92604 370 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 ALG14Q96F25 216 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 CCDC28BQ9BUN5 200 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 POLR3BQ9NW08 1133 aaPredicted RBP24.53■■□□□ 1.52
VRK2-202ENST00000412104 C15orf41Q9Y2V0 281 aa24.53■■□□□ 1.52
VRK2-202ENST00000412104 UBA6A0AVT1 1052 aaPredicted RBP24.52■■□□□ 1.52
VRK2-202ENST00000412104 CTSAP10619 480 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 COX4I1P13073 169 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 RAG1P15918 1043 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 GNAZP19086 355 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 SP100P23497 879 aaPredicted RBP24.52■■□□□ 1.52
VRK2-202ENST00000412104 ABL2P42684 1182 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 SULT2A1Q06520 285 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 HS6ST3Q8IZP7 471 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 MAB21L3Q8N8X9 362 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 DCAF4L2Q8NA75 395 aa24.52■■□□□ 1.52
VRK2-202ENST00000412104 MRPS31Q92665 395 aaKnown RBP24.52■■□□□ 1.52
VRK2-202ENST00000412104 DNMT3BQ9UBC3 853 aaKnown RBP24.52■■□□□ 1.52
VRK2-202ENST00000412104 LSM7Q9UK45 103 aaKnown RBP24.52■■□□□ 1.52
VRK2-202ENST00000412104 F8W8V4 182 aa24.51■■□□□ 1.51
VRK2-202ENST00000412104 PDAP1Q13442 181 aaKnown RBP24.51■■□□□ 1.51
VRK2-202ENST00000412104 ATXN7L2Q5T6C5 722 aaPredicted RBP24.51■■□□□ 1.51
VRK2-202ENST00000412104 FRMD7Q6ZUT3 714 aa24.51■■□□□ 1.51
VRK2-202ENST00000412104 RPS27LQ71UM5 84 aaKnown RBP24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms