RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 DUSP10Q9Y6W6 482 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 MYLKQ15746 1914 aa19.08■□□□□ 0.64
SF3A1-202ENST00000411423 NDUFA10O95299 355 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SOD1P00441 154 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 FUCA1P04066 466 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 PECAM1P16284 738 aaPredicted RBP19.07■□□□□ 0.64
SF3A1-202ENST00000411423 KIAA1024LP59773 190 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SKOR1P84550 965 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 CDKN3Q16667 212 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 ZCCHC8Q6NZY4 707 aaKnown RBP19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SPOCD1Q6ZMY3 1216 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 RD3Q7Z3Z2 195 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 TMEM139Q8IV31 216 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SFTPA2Q8IWL1 248 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SLC35F3Q8IY50 421 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 TPCN2Q8NHX9 752 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 DUSP23Q9BVJ7 150 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 SLC13A1Q9BZW2 595 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 DDX56Q9NY93 547 aaKnown RBP19.07■□□□□ 0.64
SF3A1-202ENST00000411423 KLQ9UEF7 1012 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 AMACRQ9UHK6 382 aa19.07■□□□□ 0.64
SF3A1-202ENST00000411423 EPN1Q9Y6I3 576 aaPredicted RBP19.07■□□□□ 0.64
SF3A1-202ENST00000411423 A0A0A6YYK5 440 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-202ENST00000411423 A0A0J9YYE9 177 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 A0A0U1RQJ8 604 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 LMO7DNF2Z398 122 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 TPP1O14773 563 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 TRBC1P01850 177 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 CYP2A6P11509 494 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-202ENST00000411423 JUPP14923 745 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 CD86P42081 329 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 PTSQ03393 145 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 AP1B1Q10567 949 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 PERM1Q5SV97 790 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 C6orf132Q5T0Z8 1188 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 LRRC66Q68CR7 880 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 PROSER1Q86XN7 944 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 ACRBPQ8NEB7 543 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 IFI44Q8TCB0 444 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.06■□□□□ 0.64
SF3A1-202ENST00000411423 HERPUD2Q9BSE4 406 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 LACRTQ9GZZ8 138 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 BRD8Q9H0E9 1235 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 CD84Q9UIB8 345 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 LAMA5O15230 3695 aa19.06■□□□□ 0.64
SF3A1-202ENST00000411423 PSTPIP1O43586 416 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 OPA1O60313 960 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 RASGRP1O95267 797 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 HOXC4P09017 264 aaPredicted RBP19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CDK4P11802 303 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 HTR1BP28222 390 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CYLC1P35663 651 aaPredicted RBP19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CYP4F3Q08477 520 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 HS1BP3Q53T59 392 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CDCP2Q5VXM1 449 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 KAZNQ674X7 775 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 USP45Q70EL2 814 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 LPCAT1Q8NF37 534 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 OR56A4Q8NGH8 313 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CCL4L1Q8NHW4 92 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 AGAP2Q99490 1192 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 MAK16Q9BXY0 300 aaKnown RBP19.05■□□□□ 0.64
SF3A1-202ENST00000411423 ABCG8Q9H221 673 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CCDC86Q9H6F5 360 aaKnown RBP19.05■□□□□ 0.64
SF3A1-202ENST00000411423 PCDH9Q9HC56 1237 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 DGKBQ9Y6T7 804 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 CACNA1BQ00975 2339 aa19.05■□□□□ 0.64
SF3A1-202ENST00000411423 GOLGA4Q13439 2230 aaKnown RBP19.04■□□□□ 0.64
SF3A1-202ENST00000411423 hCG_1818297A0A087WSY0 165 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 EME2A4GXA9 379 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-202ENST00000411423 CAPN8A6NHC0 703 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 PSMD11O00231 422 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 CST8O60676 142 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 MT-CO3P00414 261 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 ANXA6P08133 673 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 TGM2P21980 687 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 SPA17Q15506 151 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 QPCTQ16769 361 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 C11orf63Q6NUN7 778 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 EFL1Q7Z2Z2 1120 aaKnown RBP19.04■□□□□ 0.64
SF3A1-202ENST00000411423 HEATR4Q86WZ0 1026 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 TMTC1Q8IUR5 882 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 DCBLD1Q8N8Z6 715 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 SCAMP4Q969E2 229 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 TADA1Q96BN2 335 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 ZNF830Q96NB3 372 aaPredicted RBP19.04■□□□□ 0.64
SF3A1-202ENST00000411423 AGAP3Q96P47 875 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 WDR24Q96S15 920 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 RBM15Q96T37 977 aaKnown RBP eCLIP19.04■□□□□ 0.64
SF3A1-202ENST00000411423 TEX101Q9BY14 249 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 WDR26Q9H7D7 661 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 SEPT10Q9P0V9 454 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 PCDHB1Q9Y5F3 818 aa19.04■□□□□ 0.64
SF3A1-202ENST00000411423 CPED1A4D0V7 1026 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 CACNB4O00305 520 aaPredicted RBP19.03■□□□□ 0.64
SF3A1-202ENST00000411423 CLDN7O95471 211 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 TNFP01375 233 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 CEACAM5P06731 702 aa19.03■□□□□ 0.64
SF3A1-202ENST00000411423 ZFXP17010 805 aaPredicted RBP19.03■□□□□ 0.64
SF3A1-202ENST00000411423 CES1P23141 567 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms