RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SEPT5Q99719 369 aaPredicted RBP5□□□□□ -1.61
LSM5-205ENST00000409952 EGFL8Q99944 293 aa5□□□□□ -1.61
LSM5-205ENST00000409952 KRT23Q9C075 422 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ABCG8Q9H221 673 aa5□□□□□ -1.61
LSM5-205ENST00000409952 MMP27Q9H306 513 aa5□□□□□ -1.61
LSM5-205ENST00000409952 Q9N2J8 555 aa5□□□□□ -1.61
LSM5-205ENST00000409952 PIH1D3Q9NQM4 214 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 TAS2R3Q9NYW6 316 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CWC15Q9P013 229 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 AMFRQ9UKV5 643 aa5□□□□□ -1.61
LSM5-205ENST00000409952 ZNF148Q9UQR1 794 aa5□□□□□ -1.61
LSM5-205ENST00000409952 PIN4Q9Y237 131 aaKnown RBP5□□□□□ -1.61
LSM5-205ENST00000409952 DTX4Q9Y2E6 619 aa5□□□□□ -1.61
LSM5-205ENST00000409952 CHST2Q9Y4C5 530 aa5□□□□□ -1.61
LSM5-205ENST00000409952 AP1M2Q9Y6Q5 423 aa5□□□□□ -1.61
LSM5-205ENST00000409952 RGSL1A5PLK6 1076 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CBY3A6NI87 242 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CAPN14A8MX76 684 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SUV39H1O43463 412 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 RPS6KA4O75676 772 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 BCL10O95999 233 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 MT-CYBP00156 380 aaPredicted RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 IL1AP01583 271 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 GBAP04062 536 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 HEXBP07686 556 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ACHEP22303 614 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CTGFP29279 349 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 KHKP50053 298 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SCNN1GP51170 649 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ZNF81P51508 661 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 HNRNPMP52272 730 aaKnown RBP eCLIP4.99□□□□□ -1.61
LSM5-205ENST00000409952 ARSFP54793 590 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SNU13P55769 128 aaKnown RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 WDR5P61964 334 aaKnown RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 GRSF1Q12849 480 aaKnown RBP eCLIP4.99□□□□□ -1.61
LSM5-205ENST00000409952 TRIM29Q14134 588 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 RRS1Q15050 365 aaKnown RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 PGM5Q15124 567 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 MYLK3Q32MK0 819 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 C6orf163Q5TEZ5 329 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SFMBT2Q5VUG0 894 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ETFRF1Q6IPR1 90 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 Q6ZRM9 215 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ARID3BQ8IVW6 561 aaPredicted RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 CNTN4Q8IWV2 1026 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 KLHL7Q8IXQ5 586 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 TBC1D21Q8IYX1 336 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SCYL3Q8IZE3 742 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NHLRC2Q8NBF2 726 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 IPMKQ8NFU5 416 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 OR10S1Q8NGN2 331 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CFAP61Q8NHU2 1237 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 HASPINQ8TF76 798 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 TMEM170AQ8WVE7 144 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ZNF606Q8WXB4 792 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 SYAP1Q96A49 352 aaPredicted RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 NLRP4Q96MN2 994 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NEK1Q96PY6 1258 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ABHD14AQ9BUJ0 271 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NUF2Q9BZD4 464 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NUAK2Q9H093 628 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 GOLPH3LQ9H4A5 285 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ANKZF1Q9H8Y5 726 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 GALNT9Q9HCQ5 603 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 PAG1Q9NWQ8 432 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NINJ2Q9NZG7 142 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 IL17BQ9UHF5 180 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CCNL1Q9UK58 526 aaPredicted RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 CPSF3Q9UKF6 684 aaKnown RBP4.99□□□□□ -1.61
LSM5-205ENST00000409952 FZD4Q9ULV1 537 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 ICKQ9UPZ9 632 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 CARD8Q9Y2G2 431 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 NOX1Q9Y5S8 564 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 MAU2Q9Y6X3 613 aa4.99□□□□□ -1.61
LSM5-205ENST00000409952 MAGEB17A8MXT2 336 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 PRYO14603 147 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 CLIC2O15247 247 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 OGG1O15527 345 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 NOL3O60936 208 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 GPC4O75487 556 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 DDHD2O94830 711 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 CELF2O95319 508 aaKnown RBP4.98□□□□□ -1.61
LSM5-205ENST00000409952 PEX11BO96011 259 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 KLKB1P03952 638 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 RHOP08100 348 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ADH4P08319 380 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 FCGR2AP12318 317 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ITGAXP20702 1163 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 TGM2P21980 687 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 KCNA5P22460 613 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 PTGER1P34995 402 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ARSEP51690 589 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 PDE1AP54750 535 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 NXPH1P58417 271 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ECT2LQ008S8 904 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 ME3Q16798 604 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 HFEQ30201 348 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 SPDYE7PQ495Y7 208 aa4.98□□□□□ -1.61
LSM5-205ENST00000409952 GLE1Q53GS7 698 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms