RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 NHSQ6T4R5 1651 aa7.32□□□□□ -1.24
SCN9A-202ENST00000409435 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CNOT3O75175 753 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ATP6V1C1P21283 382 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 WARSP23381 471 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CNR2P34972 360 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 POU4F1Q01851 419 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 LRIG3Q6UXM1 1119 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RNF19BQ6ZMZ0 732 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 FAM9CQ8IZT9 166 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SCAIQ8N9R8 606 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SHC3Q92529 594 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 MTO1Q9Y2Z2 717 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZNF24P17028 368 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ATP4AP20648 1035 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ID4P47928 161 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 USP10Q14694 798 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PAGE2BQ5JRK9 111 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CERCAMQ5T4B2 595 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 BNIPLQ7Z465 357 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 TMEM110Q86TL2 294 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RAB43Q86YS6 212 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PEX5LQ8IYB4 626 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PCYOX1LQ8NBM8 494 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 LRRC20Q8TCA0 184 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ITFG2Q969R8 447 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 TMEM121Q9BTD3 319 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 DCLRE1BQ9H816 532 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 DDX18Q9NVP1 670 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZC3H7BQ9UGR2 993 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 EVLQ9UI08 416 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SMG5Q9UPR3 1016 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 MYO1GB0I1T2 1018 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 FAM58BPP0C7Q3 252 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SNHG28P0DPA3 235 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 JUNDP17535 347 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NUDT1P36639 197 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RAB25P57735 213 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SLC51AQ86UW1 340 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RAVER1Q8IY67 606 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 GALNT15Q8N3T1 639 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 UXS1Q8NBZ7 420 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 S100PBPQ96BU1 408 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ERP27Q96DN0 273 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 C5orf34Q96MH7 638 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PRMT1Q99873 361 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 C17orf62Q9BQA9 187 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 DHX33Q9H6R0 707 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CUEDC1Q9NWM3 386 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 MRTO4Q9UKD2 239 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SHOC2Q9UQ13 582 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 GRID2IPA4D2P6 1211 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SRFP11831 508 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NQO1P15559 274 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CTPS1P17812 591 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ITGA3P26006 1051 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 FLT3P36888 993 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 TFF2Q03403 129 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CBX3Q13185 183 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RAB33AQ14088 237 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NT5DC1Q5TFE4 455 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 STK40Q8N2I9 435 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CCDC185Q8N715 623 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 MINDY2Q8NBR6 621 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 SPATA20Q8TB22 786 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RNFT2Q96EX2 444 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZDHHC12Q96GR4 267 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CITED4Q96RK1 184 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 TTLL2Q9BWV7 592 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 AP1M1Q9BXS5 423 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 KLHL4Q9C0H6 718 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 GOLPH3Q9H4A6 298 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 FAM86C1Q9NVL1 165 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZNF224Q9NZL3 707 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CIDEBQ9UHD4 219 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZNF180Q9UJW8 692 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 TELO2Q9Y4R8 837 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 E2F8A0AVK6 867 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 E5RJQ4 531 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 BCAT2O15382 392 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NDUFA10O95299 355 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PLGP00747 810 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 MLNP12872 115 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 UCHL3P15374 230 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ABL2P42684 1182 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CASP5P51878 434 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 GTF2BQ00403 316 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 LRRC74AQ0VAA2 488 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZSWIM7Q19AV6 140 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ARSJQ5FYB0 599 aaPredicted RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 PIK3R6Q5UE93 754 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 ZCCHC8Q6NZY4 707 aaKnown RBP7.31□□□□□ -1.24
SCN9A-202ENST00000409435 CNSTQ6PJW8 725 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 KRT78Q8N1N4 520 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 KCTD13Q8WZ19 329 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 RFFLQ8WZ73 363 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 OVCA2Q8WZ82 227 aa7.31□□□□□ -1.24
SCN9A-202ENST00000409435 NUS1Q96E22 293 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms