RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 LRTOMTQ8WZ04 291 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 NACC2Q96BF6 587 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 NSMCE3Q96MG7 304 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PACSIN1Q9BY11 444 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 KLC2Q9H0B6 622 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 ENKD1Q9H0I2 346 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 GBA3Q9H227 469 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 VPS11Q9H270 941 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 GANQ9H2C0 597 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 WDCPQ9H6R7 721 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PNPOQ9NVS9 261 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TAS2R1Q9NYW7 299 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 SLC24A2Q9UI40 661 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 NENFQ9UMX5 172 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 EXOC7Q9UPT5 735 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 PRELID1Q9Y255 219 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 ITM2BQ9Y287 266 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 B3GNT3Q9Y2A9 372 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 COMMD10Q9Y6G5 202 aa5.54□□□□□ -1.52
CLK1-202ENST00000409403 TTC34A8MYJ7 566 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KPNA4O00629 521 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 RNMTO43148 476 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 NOBOXO60393 691 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 PQBP1O60828 265 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 NOL4O94818 638 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KRT6AP02538 564 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KRT6BP04259 564 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ALOX5P09917 674 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 FAM58BPP0C7Q3 252 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 SCG2P13521 617 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 SLC5A1P13866 664 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KCNA2P16389 499 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ZNF23P17027 643 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CDH2P19022 906 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 CA4P22748 312 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TKTP29401 623 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 FDFT1P37268 417 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 COILP38432 576 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 KCNC1P48547 511 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KRT6CP48668 564 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 GZMKP49863 264 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 MXI1P50539 228 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TIMM10P62072 90 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ESRRGP62508 458 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 FOLH1Q04609 750 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 MSLNQ13421 630 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 APOFQ13790 326 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 C16orf72Q14CZ0 275 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TMED2Q15363 201 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CCDC14Q49A88 953 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 FAM47AQ5JRC9 791 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 GET4Q7L5D6 327 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 LPCAT2Q7L5N7 544 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 OTOAQ7RTW8 1153 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 PLEKHH3Q7Z736 793 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ADGRE4PQ86SQ3 457 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ANKRD13BQ86YJ7 626 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 SP8Q8IXZ3 490 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ULK2Q8IYT8 1036 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KIAA0895Q8NCT3 520 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 AGBL3Q8NEM8 1001 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 RAB3IL1Q8TBN0 382 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 GDPD5Q8WTR4 605 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CHPT1Q8WUD6 406 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ZNF75CPQ92670 426 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 GLG1Q92896 1179 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 STRBPQ96SI9 672 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 MXD3Q9BW11 206 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 RAB34Q9BZG1 259 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 WWP1Q9H0M0 922 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TRABDQ9H4I3 376 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 MOV10Q9HCE1 1003 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 MSL2Q9HCI7 577 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 MLXIPLQ9NP71 852 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ARL8BQ9NVJ2 186 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 HEY2Q9UBP5 337 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 FETUBQ9UGM5 382 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TAGLN3Q9UI15 199 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 NAALADL1Q9UQQ1 740 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 LZTS1Q9Y250 596 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 TDRKHQ9Y2W6 561 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 DTNAQ9Y4J8 743 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 HEY1Q9Y5J3 304 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 ACTL7AQ9Y615 435 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 EXOC1LA0A1B0GW35 172 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 GSTTP1A0A1W2PQM5 241 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CENPBD1B2RD01 187 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 KMOO15229 486 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 MAGEB3O15480 346 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 PHGDHO43175 533 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 TIMM44O43615 452 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CCNT2O60583 730 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 NOL3O60936 208 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 TBCAO75347 108 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 OR6B1O95007 311 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 PGM3O95394 542 aa5.53□□□□□ -1.52
CLK1-202ENST00000409403 CNOT4O95628 575 aaKnown RBP5.53□□□□□ -1.52
CLK1-202ENST00000409403 APOEP02649 317 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms