RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 WSCD2Q2TBF2 565 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 DENND2CQ68D51 928 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 HSD11B1LQ7Z5J1 315 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 CCDC89Q8N998 374 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 KLHDC7BQ96G42 594 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 GTPBP2Q9BX10 602 aaKnown RBP20.32■□□□□ 0.84
PTCD3-202ENST00000409326 AP1M1Q9BXS5 423 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 MAGEE1Q9HCI5 957 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 MBNL1Q9NR56 388 aaKnown RBP20.32■□□□□ 0.84
PTCD3-202ENST00000409326 KCTD5Q9NXV2 234 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 SMARCAL1Q9NZC9 954 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 SNX11Q9Y5W9 270 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 SAR1BQ9Y6B6 198 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 ASCC3Q8N3C0 2202 aaKnown RBP20.32■□□□□ 0.84
PTCD3-202ENST00000409326 CABIN1Q9Y6J0 2220 aa20.32■□□□□ 0.84
PTCD3-202ENST00000409326 MYLKQ15746 1914 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 CEP250Q9BV73 2442 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 A0A0U1RQS6 177 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 C1orf232A0A0U1RR37 186 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA6CA6NDK9 693 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA6BA6NDN3 693 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 C1SP09871 688 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA6DP0CG33 693 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 THEGLP0DJG4 465 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 ADRA1AP35348 466 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 ACTN2P35609 894 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 STC1P52823 247 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 NXPH1P58417 271 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 ETF1P62495 437 aaKnown RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 ARHGAP8P85298 464 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 CYP1B1Q16678 543 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 SIRPB2Q5JXA9 342 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 PTAR1Q7Z6K3 402 aaPredicted RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 RAVER1Q8IY67 606 aaKnown RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 OR13H1Q8NG92 308 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 TRIM44Q96DX7 344 aaPredicted RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 NUS1Q96E22 293 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 DTD2Q96FN9 168 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 SRPK1Q96SB4 655 aaKnown RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 FICDQ9BVA6 458 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 TMEM9BQ9NQ34 198 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 GPR27Q9NS67 375 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA6AQ9NYA3 693 aa20.31■□□□□ 0.84
PTCD3-202ENST00000409326 TDRD6O60522 2096 aaKnown RBP20.31■□□□□ 0.84
PTCD3-202ENST00000409326 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.3■□□□□ 0.84
PTCD3-202ENST00000409326 CDX4O14627 284 aaPredicted RBP20.3■□□□□ 0.84
PTCD3-202ENST00000409326 TOR1BO14657 336 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 CLDN7O95471 211 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 CER1O95813 267 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 FGF1P05230 155 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 ETV3P41162 512 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 CHRNA4P43681 627 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 RABIFP47224 123 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 KCNJ1P48048 391 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 LIMK1P53667 647 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 PFN3P60673 137 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 KCTD11Q693B1 232 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 Q6ZSR6 202 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 TECPR1Q7Z6L1 1165 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 DCP2Q8IU60 420 aaKnown RBP20.3■□□□□ 0.84
PTCD3-202ENST00000409326 MINDY1Q8N5J2 469 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 SLC25A41Q8N5S1 370 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 GLIS1Q8NBF1 620 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 GDF3Q9NR23 364 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 PAK5Q9P286 719 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 ZNF711Q9Y462 761 aa20.3■□□□□ 0.84
PTCD3-202ENST00000409326 LRP4O75096 1905 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ZNF106Q9H2Y7 1883 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA6L10A0A0M3HER8 536 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 AGTP01019 485 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 PCCBP05166 539 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 PIRTP0C851 137 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ETS1P14921 441 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 FDFT1P37268 417 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 MTM1Q13496 603 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ZNF423Q2M1K9 1284 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 HLA-BQ31612 363 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 FAXCQ5TGI0 409 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ESRP1Q6NXG1 681 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 RANBP10Q6VN20 620 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 KDM7AQ6ZMT4 941 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 Q6ZVL8 140 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 GSTA5Q7RTV2 222 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 LYSMD3Q7Z3D4 306 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 PRUNE1Q86TP1 453 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 SPATS2Q86XZ4 545 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 SLC22A18ASQ8N1D0 253 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 OR2I1PQ8NGU4 316 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 CCHCR1Q8TD31 782 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 NETO1Q8TDF5 533 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 MAGOHBQ96A72 148 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 LRRC45Q96CN5 670 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 GAREM1Q9H706 876 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ERVMER34-1Q9H9K5 563 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 ZFYVE1Q9HBF4 777 aa20.29■□□□□ 0.84
PTCD3-202ENST00000409326 DNAAF2Q9NVR5 837 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
PTCD3-202ENST00000409326 GOLGA8CPA6NN73 597 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 PSMD3O43242 534 aa20.28■□□□□ 0.84
PTCD3-202ENST00000409326 PHF2O75151 1096 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms